Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181456g00001 ATGCTCAAGAAAATGAAGTTTCTTTCACTTCTCAAGAGCAAAACTATTATTAGGTCTTTGCCATCTTGTCACCAACAACCTAGAACCCTTTCTTTCAAAGACTTAGCCAACAATGAAATGTTCAAAACTATTAATTCAGCCTTCAACATTATTATTGATGAAGATAATAATAATAATGTTCATCATGTTATTGAAGAAGAATTATCCCTTTTCACTGACCAATCTTTTGAGGAGTGTGATGATGATGCTACTAGCTTCTCTACATCTTCTGAGGATGATCCAATTGAGACATTGATTCATGAATTGATGATGTGTTCTTCAGATGATGATGATAACAAGAACAAGAAGAAGAACAACAACAATAGGCTTTTCTTTGAGCTTGATGAAACAAGTTCAATTTTTGAAGCATCAAAGAATAATAAGGGTTCATTATTACTCAAGGATAGTGTTGTTTTGTCCTTGGATTCTAATGACCCTTTTCTTGATTTCAAGAAATCAATGGAGGAAATGGTTGAGGCTCTTGATGGTTTGAAGAAAGATTGGGAGGGTCTTCAAGATCTCTTGTCTTGGTATTTGAAGGTTAATGCCAAATCCAATCATGGCTATATTGTTGGTGCTTTTGTTGATTTATTG 633 0.3381 MLKKMKFLSLLKSKTIIRSLPSCHQQPRTLSFKDLANNEMFKTINSAFNIIIDEDNNNNVHHVIEEELSLFTDQSFEECDDDATSFSTSSEDDPIETLIHELMMCSSDDDDNKNKKKNNNNRLFFELDETSSIFEASKNNKGSLLLKDSVVLSLDSNDPFLDFKKSMEEMVEALDGLKKDWEGLQDLLSWYLKVNAKSNHGYIVGAFVDLL 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181456g00001 211 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 85 211 IPR038933 GO:0045892
Stsc181456g00001 211 ProSiteProfiles OVATE domain profile. 152 211 IPR006458 -
Stsc181456g00001 211 NCBIfam uncharacterized plant-specific domain TIGR01568 151 211 IPR006458 -
Stsc181456g00001 211 Pfam Transcriptional repressor, ovate 156 211 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181456g00001 Stsc-Chr181456 3559 4191 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Stsc181456g00001 Ovate 2.3e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181456g00001 - - ahf:112729485 252.677