Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181455g00006 ATGTCGGAATCGGAGGTTGTTTGCGTCACCGGCGGAAGCGGTTGCATTGGATCCTGGCTTGTGCATCTCCTCCTCACTCGCGGCTACACCGTTCACGCCACCGTCAAAGATCTCAAGGATGATGCTGAGACGAAGCATCTAGAAGCTCTCGAAGCAGCGTCCACGCGTCTCCGTCTCTTCCAAATCGACCTTCTCCAGTACGACACCATCACCGCCGCCGTGCGTGGCTGCTCCGGCGTCTTCCACCTCGCTTCGCCCTGCATTGTCGACGAAGTCCATGACCCACAGAAGGAGCTTCTGGACCCTGCCATTAGAGGGACAATGAATGTCCTTGAAGCGGCAAAAGAAGCAGGGGTGAAGCGTGTCGTGGTAACGTCTTCAATCTCGGCGATTACCCCGAGCCCCGGTTGGCCATCCGATGTTGTCAAGACAGAGGATTGTTGGACTGACACTGAATACTGCAAGCAAAAGGGGTTGTGGTATCCGCTATCCAAGACTTTAGCTGAGAAAGCTGCTTGGGACTTTGCAAAGGAGAAAGGTTTGGATGTTGTGGTGGTGAATCCGGGAACCGTGATGGGGCCTGTTATTTCGCCCAGACTTAATGCTAGCATGATCATGCTTGTTCGCCTTCTTGAAGGGTGTGACGAAACGTACGAGAACTTTTTTATGGGATCAGTCCACTTTAAAGATGTAGCCTTAGCACATATTATGGTGTATGAGAACAAAACAGCAACGGGTAGGCATATGTGTGTAGAAGCCATCTCTCACTATGGTGACTTTGTGGCGAAAGTTGCGGAGCTTTATCCACAATATAACGTGCCTGAGATCCCAAGAGATACCCAACCTGGATTGTTGAGAGCAAAGGATGGATCCAAGAAACTTATGGATCTGGGTTTGGAATTTATTCCCATGGAGAAAATTATCAAGGATGCTGTAGAGTGTTTGAAGAGCAAAGGGTTCATTTCTTGA 969 0.4995 MSESEVVCVTGGSGCIGSWLVHLLLTRGYTVHATVKDLKDDAETKHLEALEAASTRLRLFQIDLLQYDTITAAVRGCSGVFHLASPCIVDEVHDPQKELLDPAIRGTMNVLEAAKEAGVKRVVVTSSISAITPSPGWPSDVVKTEDCWTDTEYCKQKGLWYPLSKTLAEKAAWDFAKEKGLDVVVVNPGTVMGPVISPRLNASMIMLVRLLEGCDETYENFFMGSVHFKDVALAHIMVYENKTATGRHMCVEAISHYGDFVAKVAELYPQYNVPEIPRDTQPGLLRAKDGSKKLMDLGLEFIPMEKIIKDAVECLKSKGFIS 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181455g00006 322 FunFam Cinnamoyl-CoA reductase 1 1 322 - -
Stsc181455g00006 322 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 4 312 - -
Stsc181455g00006 322 CDD FR_SDR_e 7 299 - -
Stsc181455g00006 322 Gene3D - 1 322 - -
Stsc181455g00006 322 Pfam NAD dependent epimerase/dehydratase family 7 247 IPR001509 -
Stsc181455g00006 322 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 3 315 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181455g00006 Stsc-Chr181455 39923 42711 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181455g00006 3 322 Monolignol Biosynthesis Gene Families AT5G58490 79.062 0.0 545
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181455g00006 - - adu:107458329 636.721