Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181453g00008 ATGAATTTCCATTCAACAAGTTGTTGTCTCTACTTCTATGTATTCATATTTTTTCTTCTCCAAGTTGAGGCTACTACTGATGGAGACAGCAAAGTCATATCTGTAGGCGCCATCATCGATGTTAACTCGCGTATTGGGAAAGAACAGCTAGTAGCCCTGGACATTGCAGCTCAAAGTTTCAATAACACTTCAAAGACTTACAAACTGGCTCTTCTTTTTCAGAACCCCAACAATGATCCCTTAAAAGCCACTTCCATTGGTGAAGATATGATTAAGAATCAGAACGTGGAAGTGATTGTAGGAATGCAAACTTGGACAGAAGCAGCTTTGGTAGCTGAATTAGGAAGCCAGGCTCAAGTTCCTGTCATATCCTTCACAGCACCTACCGTTACCCCACCATTGATGGCGAATCGATGGCCTTTTTTGGTGAGACTAGATAACAATGGCACTGCATATTCTAAATGCATAGCAGATATAGTGCATGCTTATGGCTGGCAAAGAGTAGTAGCCATTTATGAAGATGATGGCTATGGTGGAGATAATGGTATGGTAGGGATGCTATCTGAGGCACTCCAAGAAGTGGGTTCAATGATTGAATATCGCTTAGCGCTTCCATCGCCTTCTTATCTGCCTGATCCTGCTGAATTTCTTCAACATGAGCTGCTAAAGCTAATTGAAAATACACAATCTCGGGTGTTCATTGTTCTTCAATCATCATTAGATATGGTGATTCATTTGTTCAGAGAAGCTTCACAAATGGGTCTTGTGGATAGAGAATCAGTCTGGATAATTCCAGAAAGTATAACCAATCTATTGGATTCTGTCAATAAGTCTACTATTTCCTATGTGCAAGGAGCTATAGGGATCAAGAACTACTACTCTGAAAATAGCATAGAGTATCAAGATTTTGAAGCTCAGTTTCGGAGAACATTTCGCGCCAAGTATCCTGAGGAAGATAACTGCAACCCAGGATTCTACGCTCTGCGAGCATATGACAGCATTAGAATTGTTGCACAAGCAGTGTACAGAATAGCCAGCCACAATAGTAGTAGCAGCAGTAGTAGAAAGACTTTACTAAGAGAAATACTGTCTAGCAAATTCCTTGGTTTAAGTGGAAAAATTCAATTTGAAGCATTGCAGCTCATGCAGACTCCAACCTTAAGGATTGTAAATATTGATGGGAAGAGTTATAGAGAATTAGATTTTTGGACTCTACAACATGGATTCATCAGTAGCATAGGAGAAGGTGGAAATGCTGCTTCTAGGAACACACAGAGTTTGAGTGGAGTGGTAATTTGGCCAGGGAAATTGTTGAGAGTTCCAAAAGGGTGGAATCTACCTACTAAGGAAAATCCAATGAGAATTGCAGTGCCAGGAAGAACTTCATTTTCCAAGTTTGTCAAGGTTGATTATGGTGAGAATGGAAGGCCAAATAAATACAGTGGATTCTGCATTGAAATTTTTGATAAGGTGTTAGAACTATTGGATTATGATTTGCCATATGAGTACTATCCCATCAATGGAACCTATCCTGACCTGGTCCAACTTGTCTATAACAAGACTTATGAGGCTGTTGTTGGGGACATAACCTTACTAGCAGACAGAATGCCATATGTAGATTTCACTGTGCCATATGCAGAATCAGGATTGTCAATGGTAGTTCCATCAAAGTCAGATGAATCAGCATGGATGTTCATGAAGCCTTTCACCTGGCAAATGTGGGTGGTAACTGCTGCTATCTTGTTCTACACAATGTTGGTAGTGTGGTACCTCGAGCGAGAATCAAATCCCGATTTCCATGGCAACTGGAAGAGCCAACTTAGCACTGCACTTTGGTTTACCTTCTCCTCCCTCTTCTTTGCTCATAGGGAGAACTTGTCTAGCAACTTAAGCCGTGTTGTGATGGTGTCTTGGCTCTTTCTAGTTCTGATCCTTAACTCGAGCTACACTGCGAGTCTATCGTCGATGCTCACAGTGCAACAACTGCAACCAAATGTCACAGACATTGAGTGGCTGAAGAGGAACAACATGAAGATTGGTTGTGATGGAGATTCTTTTGTTAGGACATACCTTGAGAGAGTAGAGAGGTTCAAGACAGAAAACATCATAAATGTTAGCAGTGAATACAGCTATGTTGATATGTTCCAGAAAGGCTCCCCAGTAACGAAAGATGTGTCTAAAGCAATATTGCAGCTCTTAGAAGAGGGCGAAATAAAGAGTTTGGAAGAGAAATGGCTGAGCCCAACGGGAGAGTGCTCCAGCAATGTGACCACAAACAACACAGATAGTTTGAAGCTTAGGAGTTTCTGGATTCTGTATGTGATTTCTGGTGCAACTTCCACCATATGCTTCCTACTTTCTACCATGCATTCACTACAAGAAGGTGGTGTTGAGAGCCCTTGGAAAAGAGCTGTTACATTAGCTAAGCAGGTTTGTAAGAGCAAGAAACAAAGTGAAGAAAATGTGGCAGGTGAGGATGTAACTGACACTAACAGATGGGAATATGAGCATCAGCAGGAACTTGCTTCTCAGTTACCGGAAATCATAACAGTTTCTTCCTCTCCATCACACTCACCAATGACAACTCCTGATCATGGATAA 2601 0.4133 MNFHSTSCCLYFYVFIFFLLQVEATTDGDSKVISVGAIIDVNSRIGKEQLVALDIAAQSFNNTSKTYKLALLFQNPNNDPLKATSIGEDMIKNQNVEVIVGMQTWTEAALVAELGSQAQVPVISFTAPTVTPPLMANRWPFLVRLDNNGTAYSKCIADIVHAYGWQRVVAIYEDDGYGGDNGMVGMLSEALQEVGSMIEYRLALPSPSYLPDPAEFLQHELLKLIENTQSRVFIVLQSSLDMVIHLFREASQMGLVDRESVWIIPESITNLLDSVNKSTISYVQGAIGIKNYYSENSIEYQDFEAQFRRTFRAKYPEEDNCNPGFYALRAYDSIRIVAQAVYRIASHNSSSSSSRKTLLREILSSKFLGLSGKIQFEALQLMQTPTLRIVNIDGKSYRELDFWTLQHGFISSIGEGGNAASRNTQSLSGVVIWPGKLLRVPKGWNLPTKENPMRIAVPGRTSFSKFVKVDYGENGRPNKYSGFCIEIFDKVLELLDYDLPYEYYPINGTYPDLVQLVYNKTYEAVVGDITLLADRMPYVDFTVPYAESGLSMVVPSKSDESAWMFMKPFTWQMWVVTAAILFYTMLVVWYLERESNPDFHGNWKSQLSTALWFTFSSLFFAHRENLSSNLSRVVMVSWLFLVLILNSSYTASLSSMLTVQQLQPNVTDIEWLKRNNMKIGCDGDSFVRTYLERVERFKTENIINVSSEYSYVDMFQKGSPVTKDVSKAILQLLEEGEIKSLEEKWLSPTGECSSNVTTNNTDSLKLRSFWILYVISGATSTICFLLSTMHSLQEGGVESPWKRAVTLAKQVCKSKKQSEENVAGEDVTDTNRWEYEHQQELASQLPEIITVSSSPSHSPMTTPDHG 866
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181453g00008 866 Pfam Receptor family ligand binding region 51 394 IPR001828 -
Stsc181453g00008 866 Gene3D - 700 753 - -
Stsc181453g00008 866 Gene3D - 463 561 - -
Stsc181453g00008 866 Pfam Bacterial extracellular solute-binding proteins, family 3 477 747 IPR001638 -
Stsc181453g00008 866 FunFam Glutamate receptor 562 692 - -
Stsc181453g00008 866 Gene3D - 28 153 - -
Stsc181453g00008 866 Gene3D - 328 456 - -
Stsc181453g00008 866 CDD PBP1_GABAb_receptor_plant 34 409 IPR044440 -
Stsc181453g00008 866 Gene3D - 154 322 - -
Stsc181453g00008 866 SUPERFAMILY Periplasmic binding protein-like II 428 746 - -
Stsc181453g00008 866 FunFam Glutamate receptor 152 321 - -
Stsc181453g00008 866 SUPERFAMILY Periplasmic binding protein-like I 30 444 IPR028082 -
Stsc181453g00008 866 FunFam Glutamate receptor 448 562 - -
Stsc181453g00008 866 Pfam Ligand-gated ion channel 748 777 IPR001320 GO:0015276|GO:0016020
Stsc181453g00008 866 PIRSF IGluLR_plant 713 858 IPR017103 -
Stsc181453g00008 866 PIRSF IGluLR_plant 3 714 IPR017103 -
Stsc181453g00008 866 Gene3D - 562 699 - -
Stsc181453g00008 866 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 714 793 IPR015683 -
Stsc181453g00008 866 SMART GluR_14 454 748 IPR001320 GO:0015276|GO:0016020
Stsc181453g00008 866 MobiDBLite consensus disorder prediction 846 866 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181453g00008 Stsc-Chr181453 40265 43667 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181453g00008 1 794 Ion Channels AT2G29120 32.564 8.30e-134 421
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181453g00008 - - gmx:100780320 1124.77