Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181453g00005 ATGTCTGTCCCTCAATATTCTGCTTCTTTTTCCTTCTTCTCATTTCAATTCCCTTCTTGTTTGTTTCTTTTCTTCATCATCATTGTAGCTGCAACTTCTTCTTCACCATGCTTAGCCAATGTTGTTACCAACAATGGCACCCGCCGCCATCGCCAGCTCTCAGTTGATTACTATGCAAAAACATGTCCCAGTTTAGAACAGCTTGTAGGCTCAGTCACCACCCAACAATTCAAAGAATCACCTGTATCTGGACCTGCCACCATTAACCTCTTCTTCCATGACTGTTTTGTAGAAGGGTGTGATGGATCAATTCTGATAGCATCAAAGCAAGGAAGCAAGGAATTGGCAGAGAAAGATGCAGAGGTTAACAGAGAATTGAGAGTGGAAGGTTTTGAGACAGTGAGAAAAGCTAAGGAAGCAGTGGAGAGAAAGTGTCCTGGTGTAGTTTCATGTGCAGACATTCTTGCAATTGCTGCAAGAGATTATGTGCACTTGGCAGGGGGACCATACTACCAAGTGAAGAAGGGAAGATGGGATGGGATGATATCAATGGCATCAAGGGTGGAACCCAACATCCCTCATGCAAACGACACCGTTGATCAGCTCATAAAGCTCTTCAACACAAAAGGCTTAACCATACAAGACATGGTTGCTCTCTCTGGTGCCCACTCAATAGGATTTGCACACTGCAAGCACTTTGTGACAAGGCTATACAATTACAAGGGCAAGGGTCAACCAGACCCAAATGTTGACCCCAAACTCCTCAATGCACTGAGAATGTATTGCCCTAACTATGGTGGAAACATGGACATTGTTGCCCCATTTGATGCAACTACACCATTTGTATTTGACCAAGCATATTATGTCAACTTGCAGAAGAAGATGGGGCTGTTAGCTTCTGATCAGGCTTTGGTTTTGGACCCAAGAACCAAGCCTTTTGTTCAAGAGTTTGCAAATGATAAGAACAAGTTTTTTCAAGCTTTTGCAGCTGCCATAGATAGATTAAGTTTGGTGGGAGTGAAGAGAGGGAAAAAGCATGGAGAGAAGAGAAGAGACTGCAGCATGCATTCATGA 1074 0.4348 MSVPQYSASFSFFSFQFPSCLFLFFIIIVAATSSSPCLANVVTNNGTRRHRQLSVDYYAKTCPSLEQLVGSVTTQQFKESPVSGPATINLFFHDCFVEGCDGSILIASKQGSKELAEKDAEVNRELRVEGFETVRKAKEAVERKCPGVVSCADILAIAARDYVHLAGGPYYQVKKGRWDGMISMASRVEPNIPHANDTVDQLIKLFNTKGLTIQDMVALSGAHSIGFAHCKHFVTRLYNYKGKGQPDPNVDPKLLNALRMYCPNYGGNMDIVAPFDATTPFVFDQAYYVNLQKKMGLLASDQALVLDPRTKPFVQEFANDKNKFFQAFAAAIDRLSLVGVKRGKKHGEKRRDCSMHS 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181453g00005 357 Gene3D - 56 355 - -
Stsc181453g00005 357 FunFam Peroxidase 193 335 - -
Stsc181453g00005 357 Gene3D Peroxidase, domain 2 193 335 - -
Stsc181453g00005 357 PRINTS Haem peroxidase superfamily signature 167 179 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc181453g00005 357 PRINTS Haem peroxidase superfamily signature 149 166 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc181453g00005 357 PRINTS Haem peroxidase superfamily signature 276 291 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc181453g00005 357 PRINTS Haem peroxidase superfamily signature 215 230 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc181453g00005 357 PRINTS Haem peroxidase superfamily signature 84 98 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc181453g00005 357 FunFam Peroxidase 56 202 - -
Stsc181453g00005 357 ProSiteProfiles Plant heme peroxidase family profile. 52 357 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc181453g00005 357 PRINTS Plant peroxidase signature 330 343 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc181453g00005 357 PRINTS Plant peroxidase signature 86 106 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc181453g00005 357 PRINTS Plant peroxidase signature 214 226 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc181453g00005 357 PRINTS Plant peroxidase signature 129 142 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc181453g00005 357 PRINTS Plant peroxidase signature 62 81 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc181453g00005 357 PRINTS Plant peroxidase signature 167 182 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc181453g00005 357 PRINTS Plant peroxidase signature 274 289 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc181453g00005 357 PRINTS Plant peroxidase signature 148 158 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc181453g00005 357 PRINTS Plant peroxidase signature 290 307 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc181453g00005 357 ProSitePatterns Peroxidases proximal heme-ligand signature. 215 225 IPR019793 -
Stsc181453g00005 357 SUPERFAMILY Heme-dependent peroxidases 52 355 IPR010255 GO:0004601|GO:0006979|GO:0020037
Stsc181453g00005 357 CDD secretory_peroxidase 52 354 IPR033905 GO:0004601|GO:0042744
Stsc181453g00005 357 Pfam Peroxidase 73 320 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc181453g00005 357 PANTHER - 47 355 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181453g00005 Stsc-Chr181453 15264 24285 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181453g00005 22 353 Peroxidase AT2G34060 61.747 1.85e-158 446
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181453g00005 K00430 - gmx:100777463 530.02