Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181453g00002 ATGATTGAAGCTTCAAACAACCGTAATAACAATAATAAGGTGTCTGCCTTATATGTGTTTGGAGACTCCACGGTAGACCCGGGAAACAACAACTACATTAGAACAGCTTTTAAGAGCAATTTTGTACCCTACGGTATAGATTTTGCAGATCATGTTCCCACTGGAAGGTTCACCAATGGAAAGCTAGGCACTGATTTTATTGCTTCGTATGTAGGGCTTAAAGATTTGGTGCCACCATATTTGGATCCAAATATCACAAATCAAGAACTCATCACAGGAGTCAGTTTTGCCTCTGCTGGCTCTGGTTATGACCCACTTACACCAACTATAAGTAATGTAATTTCAATTCCAAGACAGTTGGAACATTTCAGAGAATACAAAAATAGGCTGGAGAGTATACTTGGTAAACAGAAAACAGAGGATCACATGAAGAAGGCTATATTTTTCATCAGTGCAGGAACAAATGACTTTGTCATTAATTATTTTACATTGCCAATTAGAAGAAGGACCCACACCCTCCTAGCATACCACCAGTTTTTGCTTCGACATGTACAAGATTTCATACAGGAATTGTTGAGTGAAGGTGCTAGAAAGTTAGCAGTGGTTGGACTACCCCCAATGGGATGCTTGCCAATCATGATCACATTCAATTCCAACAATGCCTTTCTTGATCGTGGTTGTGTCGATGTCTTTTCTTCTGTTGCAAGAAATCACAATCTCCTCCTTCAAAACCACTTGAACCTCATGCAATTGAATTCCTCTCTCTCTGCTACCGCTGCTAAGATCTCTTACATTGACATATATCACCCCTTGTCCAACATGATTCAAGACCCTCGTAATAACGGTTTTGATGAGGTAGATAGTGGTTGTTGCGGAAGTGGTTACATTGAAGCAGCGTTTATGTGCAACAGAGCGTCACATTTGTGTTCTGATGCATCAAAGTATGTATTCTGGGATTCAATACACCCTACTGAGAAGGCATACTACAACTTATACATGGATTCACGCCACGTCATTGATGCACTTGTAAACGCCTAG 1038 0.4037 MIEASNNRNNNNKVSALYVFGDSTVDPGNNNYIRTAFKSNFVPYGIDFADHVPTGRFTNGKLGTDFIASYVGLKDLVPPYLDPNITNQELITGVSFASAGSGYDPLTPTISNVISIPRQLEHFREYKNRLESILGKQKTEDHMKKAIFFISAGTNDFVINYFTLPIRRRTHTLLAYHQFLLRHVQDFIQELLSEGARKLAVVGLPPMGCLPIMITFNSNNAFLDRGCVDVFSSVARNHNLLLQNHLNLMQLNSSLSATAAKISYIDIYHPLSNMIQDPRNNGFDEVDSGCCGSGYIEAAFMCNRASHLCSDASKYVFWDSIHPTEKAYYNLYMDSRHVIDALVNA 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181453g00002 345 PANTHER GDSL ESTERASE/LIPASE EXL3 14 331 - -
Stsc181453g00002 345 SUPERFAMILY SGNH hydrolase 143 329 - -
Stsc181453g00002 345 FunFam GDSL esterase/lipase APG 6 337 - -
Stsc181453g00002 345 CDD SGNH_plant_lipase_like 16 345 IPR035669 -
Stsc181453g00002 345 Gene3D SGNH hydrolase 3 340 IPR036514 -
Stsc181453g00002 345 Pfam GDSL-like Lipase/Acylhydrolase 17 328 IPR001087 GO:0016788
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181453g00002 Stsc-Chr181453 4713 7881 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181453g00002 5 328 Pollen Coat Proteome AT1G75930 35.780 2.78e-56 185
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181453g00002 - - gmx:100804919 477.248