Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181452g00007 ATGGTTTTTAGCTCGCGTTTGGTATACTACCTCCTCAGACCCTTAAGTCAGCCTCATCTTGTTTCTGATCTTCTTGCGGGTATTTTGCTAAGTTCATTACTTCAGCTGGGAGGGGATGGGATTCTGAGAGACATTTTCCCTATAAAGATCATACTTGCTATTGCAACCATAGCACAACTGGGTCTCATCTTCTATGTATTCCTCACAGGGCTTGAGATGAACCTAGATTTTGTTTTAAGAGCACCTAAGAAACCCACAATAATTGCAATTTGCAGCACTTTGGTTCCAATGATGTTGGGAACTTTCAGCTATTCTTTAGTAACAATAGTGGACAAGAAATTGTTAAAGAAGTCTGGTGAAACATATCAGTACAATAGACCCCAATGTTATTTTATGTGGTCTATGGTTCTTAGCATCACAGGTTTCCCTGTTCTTGCAAACATCCTTGTTGACCTTAAGCTTCTCTACACTAGGCTTGGTAAATTGGCATTAACAGTAGCAACACACAATGACTTCTATAATTGGCTTATGTTTGCAATGATGGTTCCATTTTTTGTTAATGGTTACAGAGCTGTTTACTCAATGCTGTGTGTCATAGCTTTTATCCTCTTAAGCCACTTTGTGTTACGCCCTTTGCTAGAGAAGATAGTATCCAAGAAACCCAACAAGCATGAATGGACCAATTACCAGTTGTCCTTTGTGATTATGGGGCTTTTCGCTTGCACAGGGCTTACCGATATCCTCGGCGCAAATCCCCTTGTCGGGGCGTTGATTTACGGGCTTGCCATTCCACGCGGGAGTTTCGCGGAGTTGCTGATCGAGAGATCGGATGATTTCGGATCTAGATACTTAGCACCCTTATTCTTTGTGAGTTGTGGCTTGAGGACCAACCTAGTGAAGGTTTTGCAGCATGCAGAGGGGTGCTTGGTTGTTATAGCAGTGATTTTATCTATGTGCACAAAGATTGTTACTACATTTGCAGTTACTCGCTACTATGGTATGCCTTTCAGAGAGAGTATGGCTTTTGGGTTGCTTATGAACACCAAAGGCATCTTGTCACTCATAGTGCTCAACATTGCATGGGATAAGCAGATTGTGGATGATTCAAATTCTGATGATTCTAACTATGAGCCTATGAAAGCTATAAACTAA 1152 0.4141 MVFSSRLVYYLLRPLSQPHLVSDLLAGILLSSLLQLGGDGILRDIFPIKIILAIATIAQLGLIFYVFLTGLEMNLDFVLRAPKKPTIIAICSTLVPMMLGTFSYSLVTIVDKKLLKKSGETYQYNRPQCYFMWSMVLSITGFPVLANILVDLKLLYTRLGKLALTVATHNDFYNWLMFAMMVPFFVNGYRAVYSMLCVIAFILLSHFVLRPLLEKIVSKKPNKHEWTNYQLSFVIMGLFACTGLTDILGANPLVGALIYGLAIPRGSFAELLIERSDDFGSRYLAPLFFVSCGLRTNLVKVLQHAEGCLVVIAVILSMCTKIVTTFAVTRYYGMPFRESMAFGLLMNTKGILSLIVLNIAWDKQIVDDSNSDDSNYEPMKAIN 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181452g00007 383 PANTHER CATION/H + ANTIPORTER 3 368 - -
Stsc181452g00007 383 Gene3D - 1 372 IPR038770 -
Stsc181452g00007 383 Pfam Sodium/hydrogen exchanger family 2 367 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181452g00007 Stsc-Chr181452 51594 53296 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181452g00007 11 369 Antiporter Super Family AT2G13620 31.129 1.17e-58 202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181452g00007 - - ahf:112711086 548.895