Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181450g00005 ATGGCGGAATCATCTCGCGAGGAGAACGTGTACATGGCAAAGCTTGCGGAGCAGGCGGAGCGGTACGAGGAGATGGTGGAGTTCATGGAGAAGGTGGCCAAGTCTTCAGACAACGAAGAGCTGACGGTGGAGGAGAGGAACCTGCTTTCGGTTGCTTACAAGAACGTGATCGGTGCGAGGAGGGCTTCATGGAGGATCATCTCGTCGATTGAGCAGAAGGAGGAGAGTAGGGGCAACGAGGACCATGTTGCAACCATCAAGGAGTATAGGGGAAAGATTGAAACTGAGCTCAGCAAGATCTGTGATGGCATTTTGAACCTCCTTGAGTCCAACCTTGTACCCTCTGCTACCACCCCTGAGTCCAAAGTCTTCTACCTCAAGATGAAGGGTGATTATCATAGGTACCTCGCTGAGTTCAAGACTGCTGCTGAGAGAAAAGAAGCTGCTGAGAGTACTTTGTTGGCTTACAAGTCTGCTCAGGATATTGCTCTTACCGAGCTTCCTCCTACTCACCCGATAAGGCTGGGTCTGGCACTCAACTTCTCTGTGTTCTATTATGAAATTCTTAACTCACCGGATCGTGCTTGTAATCTCGCCAAGCAGGCATTTGATGAAGCAATTTCCGAGCTTGACACCTTGGGTGAAGAATCATACAAGGACAGTACCTTGATCATGCAACTTCTCAGAGACAATCTGACTTTGTGGACATCTGATATCACGGATGAAGCCGGAGATGAGATCAAGGAAACATCTAAGCCACAACCAGACGAGGGGCAGTAG 780 0.4936 MAESSREENVYMAKLAEQAERYEEMVEFMEKVAKSSDNEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDHVATIKEYRGKIETELSKICDGILNLLESNLVPSATTPESKVFYLKMKGDYHRYLAEFKTAAERKEAAESTLLAYKSAQDIALTELPPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLGEESYKDSTLIMQLLRDNLTLWTSDITDEAGDEIKETSKPQPDEGQ 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181450g00005 259 Coils Coil 12 39 - -
Stsc181450g00005 259 ProSitePatterns 14-3-3 proteins signature 2. 218 237 IPR023409 -
Stsc181450g00005 259 ProSitePatterns 14-3-3 proteins signature 1. 46 56 IPR023409 -
Stsc181450g00005 259 Gene3D - 1 249 IPR036815 -
Stsc181450g00005 259 SMART 1433_4 6 249 IPR023410 -
Stsc181450g00005 259 PANTHER 14-3-3 PROTEIN 6 239 IPR000308 -
Stsc181450g00005 259 PIRSF 14-3-3 1 248 IPR000308 -
Stsc181450g00005 259 FunFam 14-3-3 protein epsilon 1 249 - -
Stsc181450g00005 259 Pfam 14-3-3 protein 12 236 IPR023410 -
Stsc181450g00005 259 SUPERFAMILY 14-3-3 protein 5 238 IPR036815 -
Stsc181450g00005 259 PRINTS 14-3-3 protein zeta signature 120 142 IPR000308 -
Stsc181450g00005 259 PRINTS 14-3-3 protein zeta signature 155 181 IPR000308 -
Stsc181450g00005 259 PRINTS 14-3-3 protein zeta signature 209 238 IPR000308 -
Stsc181450g00005 259 PRINTS 14-3-3 protein zeta signature 40 69 IPR000308 -
Stsc181450g00005 259 PRINTS 14-3-3 protein zeta signature 89 113 IPR000308 -
Stsc181450g00005 259 PRINTS 14-3-3 protein zeta signature 182 208 IPR000308 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181450g00005 Stsc-Chr181450 9287 11942 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181450g00005 4 259 14-3-3 family AT3G02520 88.716 1.07e-169 467
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181450g00005 K06630 - gmx:547657 470.314