Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181448g00007 ATGTTCACTGTTGGCGCTAGCACAATAGACAGAGACTTTGCTAATTATGTTGCACTTGGGGACAAGAAGCACTTAATGATTGGAAGTCTTGATCCGAAGAAGACAAAGGGAAAAATATTGGTTTGCCTGTTAGATGAGATTGATGGGTTAGTTTATGCAGAGGAGGAAGCACTTTCAAAAGGAATAATAGGACTAATTTTGGCAAATAATAAGCAGCGTGGTAATGATATCATAGCATTTGCTCATTTGTTGCCTACAACAAATATCAACTATACAGATGGTGAATATGTTTATTCCTACATTAGAGCCACCACGAACCCCAAGGCTTGCATGAGCAGCGCAAAGACTGAAGTGGGAGTAAAACCAGCACCACTAATTGCTTCTTTATCATCTAGGGGACCCAATCTCATCCAGCCATCAATCCTAAAGCCTGATGTTATTGCACCAGGTGTAGACATTTCCGGAACTTCTATTTCTTCTCCTCATGTTGCTGCCATTGCTGCCCTCCTCAAGATTCTATATCCAGATTGGACTCCTGCAGCTATCAAATCTGCAATCATGACTACTGCAACAACAATGGAAGAAAACATGCCACTTTTGGATCAATCTAAACAAGAAGCAACTTCATTTACTTATAGAGCAGGACACATGGAACCAGAGCTCGCGGCGGATCCTGGCCTTGTTTATGATCTAACCATTGATGACTACTTGAACTGCCTATGTGCTCATCATGATTTCAATTACCCTTCAATTGTGGTTCCAAATCTTGGGAAACACTTGGTTGAAGTAAGTCGTACAGTTACAAATGTTGGGTCACCAGGAATATATTGGGTTTATGTGAAGGAGTCTTATGGGGTTTCGGTTTTGGTTAAACCAAAGTATTTGGAATTAACAAAGTTGGTGAAAAGAAGACATTTAAGGTAA 924 0.4037 MFTVGASTIDRDFANYVALGDKKHLMIGSLDPKKTKGKILVCLLDEIDGLVYAEEEALSKGIIGLILANNKQRGNDIIAFAHLLPTTNINYTDGEYVYSYIRATTNPKACMSSAKTEVGVKPAPLIASLSSRGPNLIQPSILKPDVIAPGVDISGTSISSPHVAAIAALLKILYPDWTPAAIKSAIMTTATTMEENMPLLDQSKQEATSFTYRAGHMEPELAADPGLVYDLTIDDYLNCLCAHHDFNYPSIVVPNLGKHLVEVSRTVTNVGSPGIYWVYVKESYGVSVLVKPKYLELTKLVKRRHLR 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181448g00007 307 ProSitePatterns Serine proteases, subtilase family, serine active site. 155 165 IPR023828 -
Stsc181448g00007 307 Pfam Subtilase family 99 199 IPR000209 GO:0006508|GO:0008236
Stsc181448g00007 307 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 1 297 IPR045051 -
Stsc181448g00007 307 CDD PA_subtilisin_like 26 109 - -
Stsc181448g00007 307 Gene3D - 242 306 - -
Stsc181448g00007 307 SUPERFAMILY Subtilisin-like 2 216 IPR036852 GO:0004252|GO:0006508
Stsc181448g00007 307 Gene3D - 28 118 - -
Stsc181448g00007 307 ProSiteProfiles Serine proteases, subtilase domain profile. 1 223 - -
Stsc181448g00007 307 Pfam Fibronectin type-III domain 245 303 IPR041469 -
Stsc181448g00007 307 Gene3D Peptidase S8/S53 domain 154 236 IPR036852 GO:0004252|GO:0006508
Stsc181448g00007 307 Gene3D Peptidase S8/S53 domain 119 153 IPR036852 GO:0004252|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181448g00007 Stsc-Chr181448 24035 26817 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181448g00007 3 307 Subtilisin-like Serine Gene Family AT2G04160 40.306 6.91e-82 261
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181448g00007 - - pcin:129318364 355.14