Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181446g00015 ATGTGTGTGTGTGAGATTTCAATTTTGAATTTCAGAAGTGAAAGTGATGAGGGTATGGCAGTGATGAGGGAAACAGATAACAACTTCAATTTAGGGCATCTTTTCAATCTCCACCTCCAAACCCCTAACAACAACAACAATAACCCCCTTACTACTACTCACCATCAACAACAACAACAATTCAACTCTCCTCCTCCTCCTGAAGCTGATGGTGATGCTGCTGGAGCTTCAAGCGGAGGAACATCAGCTGAAACCTCCACTGGCCGCCGTCCAAGGGGCCGACCAGCAGGATCCAAGAACAAGCCAAAACCACCGATCCTAGTCACGCGGGACACCCCCAATGCACTCCGCTGCCACGTGCTTGAGGTCTCCGCCGGCTCTGAGATCCTCGAAACACTCTCCTCCTTCGCTCGCCGCAGGGGGAGAGGCCTTTGCATCCTCAGCGCCACTGGTACTCTCGCTAACGTTACTCTTCGCCAGCCTGGAGGCTCCGTCCTCACTCTTCATGGAACCTTCGAGATCCTCACCATATCCGGGACGATTCTCCCGCCGCCTGCTCCACCGGGAGCAGGCGGGCTTTCGGTGTACCTGTCCGGCGGGCAGGGGCAGGTGGTTGGTGGCAACGTAGTGGCCCCTCTTGTGGCTTCAGCTGTGGTGGTTCTGATGGCTGCTTCGTTTGCAAATGCGATGTTTGAGAGATTGCCCTTGAATTTGGACGATGATGATCCTCGTCAGGACGATGACCAATTCAATCAGCAACCACAACAGCCTGCAGCATCGCAATCCTCTGCCGTCACTGGCCAGCTCGGCGAACAGGCCAGCAGCGGCCGCGCTGTTTCTTTCTTCAATTTGGCAGCAGGTGGTAGTGGTGGTGGTGGAGGAAGGGGTATGAACGGAAGGAGCGGCTATCCCTTGTCGGTTCCCTGCAGCGGTGATCTATTTGGATTGGGTGGTGGCGGCGGTGCAGGTGCAAGTGCAGCAGCAGCGATCAAGCCTCCGCCGTTCTAG 1008 0.5565 MCVCEISILNFRSESDEGMAVMRETDNNFNLGHLFNLHLQTPNNNNNNPLTTTHHQQQQQFNSPPPPEADGDAAGASSGGTSAETSTGRRPRGRPAGSKNKPKPPILVTRDTPNALRCHVLEVSAGSEILETLSSFARRRGRGLCILSATGTLANVTLRQPGGSVLTLHGTFEILTISGTILPPPAPPGAGGLSVYLSGGQGQVVGGNVVAPLVASAVVVLMAASFANAMFERLPLNLDDDDPRQDDDQFNQQPQQPAASQSSAVTGQLGEQASSGRAVSFFNLAAGGSGGGGGRGMNGRSGYPLSVPCSGDLFGLGGGGGAGASAAAAIKPPPF 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181446g00015 335 MobiDBLite consensus disorder prediction 39 65 - -
Stsc181446g00015 335 ProSiteProfiles PPC domain profile profile. 113 253 IPR005175 -
Stsc181446g00015 335 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 48 268 IPR014476 GO:0003680
Stsc181446g00015 335 MobiDBLite consensus disorder prediction 237 270 - -
Stsc181446g00015 335 Gene3D - 116 239 - -
Stsc181446g00015 335 Pfam Plants and Prokaryotes Conserved (PCC) domain 117 227 IPR005175 -
Stsc181446g00015 335 CDD DUF296 117 182 IPR005175 -
Stsc181446g00015 335 MobiDBLite consensus disorder prediction 39 111 - -
Stsc181446g00015 335 MobiDBLite consensus disorder prediction 249 270 - -
Stsc181446g00015 335 FunFam AT-hook motif nuclear-localized protein 116 243 - -
Stsc181446g00015 335 SUPERFAMILY AF0104/ALDC/Ptd012-like 114 236 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181446g00015 Stsc-Chr181446 63723 65355 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181446g00015 86 236 AT-hook Motif Nuclear Localized (AHL) Family AT1G76500 67.901 2.55e-64 204
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181446g00015 - - aip:107609871 322.398