Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181444g00012 ATGGCTTCCAAATTGTCCCTTAGTTTGTTCATGCTTGTGATGAGTGGGTGCATTGTTTCTTACGTGAGTTCACAGAAGACGATTCATATTGTAGGAGACAGTTTGGGTTGGATAGCACCCAAATACACGGGTTTCTATCATGATTGGGTCAAGAACAGAAAATTCTCTGTTGGTGACCAACTTTTGTTCAATTACATACCCGGGTTGAACACGGTGGTGCAGGTTGAAAAAGAGGACTACGATCATTGCTCAATGAAGAATACACTGGCTGAGTACTTCATGGGGAACACCATTTTTACGTTGAACAAGCCTGGTGAATACTATTTCATCTCTTCCGTTGGCAGGCACTGCGAGGCAAACCAAAAGCTTAAGATCACTGTTACAGAAAACAACCACTGA 399 0.4261 MASKLSLSLFMLVMSGCIVSYVSSQKTIHIVGDSLGWIAPKYTGFYHDWVKNRKFSVGDQLLFNYIPGLNTVVQVEKEDYDHCSMKNTLAEYFMGNTIFTLNKPGEYYFISSVGRHCEANQKLKITVTENNH 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181444g00012 132 Gene3D - 27 132 IPR008972 -
Stsc181444g00012 132 FunFam Cupredoxin superfamily protein 26 132 - -
Stsc181444g00012 132 ProSiteProfiles Phytocyanin domain profile. 27 129 IPR003245 GO:0009055
Stsc181444g00012 132 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 17 - -
Stsc181444g00012 132 PANTHER BLUE COPPER PROTEIN 28 128 IPR039391 GO:0009055
Stsc181444g00012 132 Pfam Plastocyanin-like domain 44 120 IPR003245 GO:0009055
Stsc181444g00012 132 SUPERFAMILY Cupredoxins 27 127 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181444g00012 Stsc-Chr181444 52564 53076 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181444g00012 22 132 Phytocyanin Superfamily AT2G25060 33.929 8.55e-21 81.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181444g00012 - - gmx:102660389 152.91