Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181444g00011 ATGGAACAGTTCCGGCACATTGGAGAGGCTCTTGGGAGTTTGAAAGCGCTTATGGTATTGCGGGACGAGATTCAAATCAACCAACGGCAGTGCTGTTTGATCCTTGAAATCTTCAGCTTGGCATTTGAGACGGTCGCGGAAGAGATCAGACAGAACCTGAAGCTGGAAGAGAGGAACAGCAAATGGAAGCCCCTGGAGATCCCTCTTAGAGAGCTCTGCAGGGTTTTCAAGGAAGCTGAGTTGTACGTCCGGCAATGTATGGATTCCAAGGAGTGGTGGGGGAAAGCCATCACCATGTCTAACAACTGTGACTGTGTTGAGTTCCATATCCACAATCTTCTCTGCCATTTCCCGGCGGTGATTGAGGCCATTGAGAATGCAGGGGAGGCGTCTTGTCTTGATCAGAGAGACAAGGACAAGAAGAAGGTCATGCTGTCAAGGAAATATGACATGGAATGGAATGATTACAAGCTTTTCCAATGGAGATTTGGGAAGCAGTACTTGGTCCCTCGGGAGATTATCAACCTCTTGGAAAATGCTTGGAAGGAAGATAGGTGGAGGCTCATAGAAGCACTCAAGGAGAAGAAGACTATGTCCAAGAAGAAGGAGCAGCGACTCGCGGAGATGCTCTTGAAGAAGCTAGTAGTAAATGGATCCAACGACAAAACTAATCATGATCTTTGGCCGATTCAAGTTCTCGTGGGAGCAAAGGATTACCAGGTGAGGCGAAGATTGGGAAAGGGGAAGGAGTATAAGGAAGTGACTTGGCTTGGACAGAGTTTTGCATTGAGGTACTTCACTGGAGAGAGGCAGGCATATGAAGGTGAGGTTTCAAGATTGCTGAGTCTTTCTCACCCAAACATATTGCAATACTTTTGTGGATTCTATGATGAGGAGAAGAAAGAGTTTAATCTTGTGATGGAGTTGATGAGCAAGGATTTATTGAGCTACATGAAAGAGAATTGCGGGCCAAGGAGGCAGATCTTGTTCTCAATTCCAGTTGTGGTGGATCTCATGCTTCAAATTGCAAGAGGCATTGAGTATCTCCACTCCAAGAACATATACCATGGAGATCTTAACCCTTGCACTATCCTACTCAAAGCTAGGAACTCCCAAGAAGGCTACTTCCATGCAAAAGTTTCAGGATTTGGGCTTTCCTCTCTGAGGAAACTTGATCCCACACAGAACTCCGAGGACCTCAATCCTACCATATGGTATGCTCCGGAAGTACTGCACGAGATAGAACATGGAGGGAAGGTTTCTACCTCGTGCAAGTACTCGGAGAAAGCAGATGCATACAGCTTTGGAATGATATGCTTTGAGTTGCTGACAGGGAAAGTCCCTTTTGAAGATAACCATCTTCAAGGGGAGAGAACCACACAGAACATCAAAGCCGGGGAGAGGCCTCTCTTTCCTTATCGTTCACCGAAATACCTTGTGAGCTTGATCAAGAAGTGTTGGCAAACTGATCCTTCACAGCGTCCTACTTTCTCTTCTATTTGTAGGATCTTGCGCTACACCAAGAAGTTCCTCTCCACCAGTACTGACGACTATATCATTCATCCAGACCTTAACAACCTTGAGCTGCAATCTCCCCCTGTGGATTGCTGCGATATAGAGACCACTTTCGCTAAGAATCTACCAGATGAGATGGTGCCTCACATTTCGCAGATTCCTTACCAGATCTTTGCTTACAAGGTTGTGGAGAAAGAGAAGATCAGTCTCTTGAATTCCAGAGACAAGGGCAGTGAGACTGACTTGCAAAAGGAAGGTTCTCAGAAAGCAAGCGATGAATTGAGCATAGGTTTTGGAGATGATCAAGTTTCCATCATGACTGAACCCTCTCAGTCTCTAACTTCTCCAAAGTCAGTTCATGGCAGCGAAACACAGTCCATTTTCTCCGAAGCACCGCCCAAGAAGACTGTGAGAATAAAGAGTCCGCCAAAACTAGACAAGCTCAAGAAAGACCAAGGTTTGTTGCTGCTTCCTACTTGA 1995 0.4591 MEQFRHIGEALGSLKALMVLRDEIQINQRQCCLILEIFSLAFETVAEEIRQNLKLEERNSKWKPLEIPLRELCRVFKEAELYVRQCMDSKEWWGKAITMSNNCDCVEFHIHNLLCHFPAVIEAIENAGEASCLDQRDKDKKKVMLSRKYDMEWNDYKLFQWRFGKQYLVPREIINLLENAWKEDRWRLIEALKEKKTMSKKKEQRLAEMLLKKLVVNGSNDKTNHDLWPIQVLVGAKDYQVRRRLGKGKEYKEVTWLGQSFALRYFTGERQAYEGEVSRLLSLSHPNILQYFCGFYDEEKKEFNLVMELMSKDLLSYMKENCGPRRQILFSIPVVVDLMLQIARGIEYLHSKNIYHGDLNPCTILLKARNSQEGYFHAKVSGFGLSSLRKLDPTQNSEDLNPTIWYAPEVLHEIEHGGKVSTSCKYSEKADAYSFGMICFELLTGKVPFEDNHLQGERTTQNIKAGERPLFPYRSPKYLVSLIKKCWQTDPSQRPTFSSICRILRYTKKFLSTSTDDYIIHPDLNNLELQSPPVDCCDIETTFAKNLPDEMVPHISQIPYQIFAYKVVEKEKISLLNSRDKGSETDLQKEGSQKASDELSIGFGDDQVSIMTEPSQSLTSPKSVHGSETQSIFSEAPPKKTVRIKSPPKLDKLKKDQGLLLLPT 664
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181444g00011 664 Pfam Protein of unknown function (DUF1221) 21 235 IPR010632 -
Stsc181444g00011 664 MobiDBLite consensus disorder prediction 611 664 - -
Stsc181444g00011 664 Gene3D Transferase(Phosphotransferase) domain 1 231 524 - -
Stsc181444g00011 664 MobiDBLite consensus disorder prediction 611 636 - -
Stsc181444g00011 664 SUPERFAMILY Protein kinase-like (PK-like) 233 530 IPR011009 -
Stsc181444g00011 664 MobiDBLite consensus disorder prediction 642 656 - -
Stsc181444g00011 664 MobiDBLite consensus disorder prediction 579 598 - -
Stsc181444g00011 664 MobiDBLite consensus disorder prediction 579 593 - -
Stsc181444g00011 664 Pfam Protein tyrosine and serine/threonine kinase 269 503 IPR001245 GO:0004672|GO:0006468
Stsc181444g00011 664 FunFam Kinase family protein 236 517 - -
Stsc181444g00011 664 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 237 505 - -
Stsc181444g00011 664 ProSiteProfiles Protein kinase domain profile. 239 511 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181444g00011 Stsc-Chr181444 47709 49703 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181444g00011 238 513 MAP Kinase Kinase Kinase AT1G14000 32.997 1.98e-27 114
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_Gdt Stsc181444g00011 PK_Tyr_Ser-Thr 1.7e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181444g00011 - - psat:127120797 930.243