Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181444g00001 ATGGAGAGTGAAAGTAGTTTGGAGAAGCAAGAACTGAAAAATGAGCTAGTTCAAGGGATGGAGGTAGCTAGAAAGCTTAAGGCAGAGTTGGGGTTAGAATCTAGTGCTCAAAATAGGGACCTGCTGGTGGAGAGAATATTGTCTTCTTATGACAAGGCTCTATTGATCCTAAGATGGAACGGATCAGTTTCCAAGTCCCACACACTGCAGCAACCAACTAAAACCTCGCCACCACAGTCCCCTCTACCCCACAAACAGGAACTAAAACACACTTCACAGAAAAGAAAGTTGATACCCAAATTGGTGAATCACGTTAAGGTGAATTCTGAGAGTGGCTTTGAAGGACTCCATGAAGATGGGTACAGCTGGAGAAAATATGGACAGAAAGACATCCTTGGCAATAAATATCCAAGAAGTTACTATAGGTGCACCTTCCGCAACACTAAGGATTGCTGGGTGACGAAGCAAGTGCAGAGATCAGAGGATGACCCCAATATATTTGACATAACTTACAAAGGAAGCCATACCTGTTCCAAGGGGAAGAAGAATGCTGTTGTGTCAGCAGAGTCACCAGAGATGCAAGAGAAACCACAAGAAAGCCAAACAAACTTCCAAAACATGTTGACTGTCGCTACGACTAACCCAGGAAATGAAGAAACGGCATGTTCTTTCACTTCCCCATCGACTTCCATTGGATTCAGGACACAAGAAAACCAGAACTTTCTTCCTTCAGTTCTAGAGAATAATCCCTTCTCGGGAAGTCTTTCCCAAACACAATTGTTATCACCAAACACACCAGAATCAAACTATTTTCCATCTCCATTCTGCGCATATGAGCTTGAAGGAATTTACAGCAATCCATGCTCGGAATTCGATGTTTCTGAGATCATTTCCGCCCACACATCAACCATCAATTCTCCAATTTTCGATTTCGATTTCTCGCTTGACCCAAATTTCCGTTTCAATGCCTCCAGATTTTCTAGCTAA 987 0.4286 MESESSLEKQELKNELVQGMEVARKLKAELGLESSAQNRDLLVERILSSYDKALLILRWNGSVSKSHTLQQPTKTSPPQSPLPHKQELKHTSQKRKLIPKLVNHVKVNSESGFEGLHEDGYSWRKYGQKDILGNKYPRSYYRCTFRNTKDCWVTKQVQRSEDDPNIFDITYKGSHTCSKGKKNAVVSAESPEMQEKPQESQTNFQNMLTVATTNPGNEETACSFTSPSTSIGFRTQENQNFLPSVLENNPFSGSLSQTQLLSPNTPESNYFPSPFCAYELEGIYSNPCSEFDVSEIISAHTSTINSPIFDFDFSLDPNFRFNASRFSS 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181444g00001 328 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 5 230 IPR044810 GO:0003700
Stsc181444g00001 328 FunFam WRKY transcription factor 53 103 180 - -
Stsc181444g00001 328 Coils Coil 9 29 - -
Stsc181444g00001 328 MobiDBLite consensus disorder prediction 66 94 - -
Stsc181444g00001 328 ProSiteProfiles WRKY domain profile. 112 175 IPR003657 GO:0003700|GO:0006355|GO:0043565
Stsc181444g00001 328 Gene3D WRKY domain 102 180 IPR036576 GO:0003700|GO:0006355|GO:0043565
Stsc181444g00001 328 SMART WRKY_cls 117 179 IPR003657 GO:0003700|GO:0006355|GO:0043565
Stsc181444g00001 328 SUPERFAMILY WRKY DNA-binding domain 116 178 IPR036576 GO:0003700|GO:0006355|GO:0043565
Stsc181444g00001 328 Pfam WRKY DNA -binding domain 118 177 IPR003657 GO:0003700|GO:0006355|GO:0043565
Stsc181444g00001 328 MobiDBLite consensus disorder prediction 66 86 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181444g00001 Stsc-Chr181444 10751 12207 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181444g00001 8 324 WRKY Transcription Factor Family AT4G11070 36.923 1.75e-51 170
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Stsc181444g00001 WRKY 1.9e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181444g00001 - - adu:107488322 543.117