Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181441g00014 ATGTTGGGGAAAGGGAACTCCAAAGGGGACGGTGGATCCAAGTCGGTAGCGAAAATACTTGCAAAGTGGAAAGAGTACAACGCGCAGCTTGATTCGAGCAGCGACGCCGATAAGCCGATTCGGAAGGTTCCGGCGAAGGGATCGAAGAAGGGTTGTATGAAAGGAAAAGGTGGACCTGAGAATTCAAGGTGTAACTACAGGGGAGTGAGGCAGAGGACTTGGGGCAAATGGGTTGCTGAAATTCGAGAACCTAACAGAGGAAGCAGGTTATGGCTTGGCACTTTCCCCACCGCCATTGGTGCTGCTCTTGCCTACGATGAAGCTGCAAGAGCTATGTACGGTTCTTGCGCACGCCTCAACTTCCCCAATGTCTCTGTCTCAAGTTTCTCTCACCATTCTTCTTCTCCTCCCCCTGCAAACCACCATGTCCATGAACATGATGATCATCTCATTTCTTTATCCTTAAGTGTAAAGCATGAATCTGGGGGTACTAACTCCCCTCCTTCATCCTCCTGA 516 0.5 MLGKGNSKGDGGSKSVAKILAKWKEYNAQLDSSSDADKPIRKVPAKGSKKGCMKGKGGPENSRCNYRGVRQRTWGKWVAEIREPNRGSRLWLGTFPTAIGAALAYDEAARAMYGSCARLNFPNVSVSSFSHHSSSPPPANHHVHEHDDHLISLSLSVKHESGGTNSPPSSS 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181441g00014 171 CDD AP2 64 123 IPR001471 GO:0003700|GO:0006355
Stsc181441g00014 171 MobiDBLite consensus disorder prediction 30 64 - -
Stsc181441g00014 171 SUPERFAMILY DNA-binding domain 65 122 IPR016177 GO:0003677
Stsc181441g00014 171 ProSiteProfiles AP2/ERF domain profile. 65 122 IPR001471 GO:0003700|GO:0006355
Stsc181441g00014 171 SMART rav1_2 65 128 IPR001471 GO:0003700|GO:0006355
Stsc181441g00014 171 Gene3D AP2/ERF domain 65 124 IPR036955 GO:0003700|GO:0006355
Stsc181441g00014 171 PRINTS Ethylene responsive element binding protein signature 88 104 IPR001471 GO:0003700|GO:0006355
Stsc181441g00014 171 PRINTS Ethylene responsive element binding protein signature 66 77 IPR001471 GO:0003700|GO:0006355
Stsc181441g00014 171 Pfam AP2 domain 64 114 IPR001471 GO:0003700|GO:0006355
Stsc181441g00014 171 FunFam Ethylene-responsive transcription factor 2 64 123 - -
Stsc181441g00014 171 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 2C 10 155 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181441g00014 Stsc-Chr181441 66263 67382 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181441g00014 12 151 AP2-EREBP Transcription Factor Family AT2G40350 54.110 8.84e-52 161
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Stsc181441g00014 AP2 1.6e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181441g00014 - K09286 adu:107462080 267.314