Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181439g00005 ATGAAAATTGCACTTGGAGCGGCAAGAGGCCTGGCATATCTTCATGAGGATTCTAATCCTCGTGTAATTCATCGAGATTTTAAGGCTAGTAACGTGCTACTAGAAGATGACTTTACCCCCAAGGTCTCTGACTTTGGATTGGCAAGAGAAGCAACTGAAGGAAGTCAGCATATTTCTACAAGGGTGATGGGAACTTTTGGGTATGTTGCCCCAGAATATGCAATGACAGGTCATTTACTTGTTAAAAGTGATGTTTATAGTTACGGTGTTGTGCTGCTTGAACTTCTTACTGGCAGAAAACCAGTGGACATGTCTCAACCTCAGGGACAGGAGAATCTAGTAACTTGGGCACGACCATTGTTGGCGAGTAGGGAAGGTTTAGAACAGTTAGTAGACCCATCTTTGGCTGGAAGTTACGACTTTGATGATATGGCCAAGGTTGCTGCTATCGCCTCCATGTGTGTTCACCCAGAGGTCACTCAGAGACCCTTCATGGGTGAAGTCGTGCAGGCTCTTAAGTTAATATACAATGATGCAGACGAGACTTGCGGAGATTACTGCAGTCAGAAGGACTCCTCCGTACAGGACTCTGATTTCAGAGGCGATCTCGCCCCTTCCGATAGCAGTTGGTGGAATGCCGGGGGGTTAACCCCTCGATTAACTTATGGGCAAGCATCATCATTCATCACCATGGAGTACAGTTCTGGTCCACTTGATGATATGGAAAACAGACCGTTTTCGACTTCAAGCTTGATTGGGGATGAGATGTCTTTACCGATTAAGCATGGGAACAGATCGGGTCCCTTGAGAACAGTCCGAAGTAAGTTATCATTGCATAGATTTACAGGAAGCCGGAGTGAACATGGGGGGCCTTCTTCCAAGCACCGTTGGAACGATGGTTACTGGGCTTAA 912 0.4638 MKIALGAARGLAYLHEDSNPRVIHRDFKASNVLLEDDFTPKVSDFGLAREATEGSQHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQPQGQENLVTWARPLLASREGLEQLVDPSLAGSYDFDDMAKVAAIASMCVHPEVTQRPFMGEVVQALKLIYNDADETCGDYCSQKDSSVQDSDFRGDLAPSDSSWWNAGGLTPRLTYGQASSFITMEYSSGPLDDMENRPFSTSSLIGDEMSLPIKHGNRSGPLRTVRSKLSLHRFTGSRSEHGGPSSKHRWNDGYWA 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181439g00005 303 ProSitePatterns Serine/Threonine protein kinases active-site signature. 22 34 IPR008271 GO:0004672|GO:0006468
Stsc181439g00005 303 SUPERFAMILY Protein kinase-like (PK-like) 2 175 IPR011009 -
Stsc181439g00005 303 Pfam Protein kinase domain 3 170 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc181439g00005 303 FunFam Receptor-like serine/threonine-protein kinase ALE2 1 193 - -
Stsc181439g00005 303 ProSiteProfiles Protein kinase domain profile. 1 175 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc181439g00005 303 Gene3D Transferase(Phosphotransferase) domain 1 1 198 - -
Stsc181439g00005 303 MobiDBLite consensus disorder prediction 280 303 - -
Stsc181439g00005 303 PANTHER OS01G0750732 PROTEIN 1 194 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181439g00005 Stsc-Chr181439 34920 36320 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181439g00005 1 292 Receptor kinase-like Gene Family AT5G56890 60.067 1.96e-98 311
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Stsc181439g00005 Pkinase 6.1e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181439g00005 - - gsj:114406979 590.112