Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181436g00011 ATGTTCAAAAGAAGCAACAGTTTTGGAGCCATGAGGATGCTATGCTGGTGGGGGTTTGGGTTTATAGGGTTGATGTTTGTGAAATTGGTACAAGGATTTGAGAATGGTAATGTGACAGACATGCTCTATTATAACAACAACAGACCTTTGATGGTTGGTCTCACTCTTATTTATGGTGCTGCTTCCAAAGGAGCTGTATGTCTGGATGGATCTTTACCGGGTTACCACTTCAACCGCGGATATGGCGCCGGATCAAACAGTTGGCTCGTACAATTGGAGGGAGGAGGCTGGTGTGGAAATGTCAGAAATTGCATTTATAGTAAGAAGACGCGGCATGGTTCGTCGGCGTTTATGGAAAAACAGATACCGTTTGTTGGGATACTGAGCAACAAAGCTGAGGAAAATCCAGATTTCTACAATTGGAATAGAATCAAAATTCGTTATTGTGATGGTGCATCGTTCACTGGAGACAGTCAAAATGAGCGAGCAGGGTTGTTTTTCAGAGGGCAACGCATCTGGCTTGCGGCTATGGAAGATCTAATGTTGAAAGGAATGCGTTATGCCAAACAGGCTCTTCTATCTGGATGTTCTGCAGGAGGTTTAGCAACAATTCTACATTGTGACGAATTTAGAGAAATGTTCCCAAGAACCACAAGAGTGAAGTGCTTAAGTGATGCTGGATTGTTCCTTGACGCTGTTGATGTATCCGGCCATCGCAGTTTGAGGAATTTTTTTGGAAGTGTGGTTGCCTTACAGGGAGCGCAACGAAACCTTCCAAGGACTTGTACCAGTCGCCTCAATCCGATTCTGTGCTTTTTCCCTCAGCACTCAATTGCCAGTGTTAAGGCACCACTGTTTCTTCTCAATGCAGCTTATGATACTTGGCAGATTCAAGCCAGCCTAGCTCCGCCGTCTGCTGACTATCATTGGAATTGGTATGATTGCAGAAAAAATTATGTGCGTTGCAGCGCACCGCAGATGCAATATCTGCAAGGTTTTCGGAATCAGATGCTAAGAGTTGTAAGAAGATTCTCAAAGTCACGTAAAAACGGGTTATTCATAAATTCTTGTTTCGCTCATTGCCAATCCGAAAGACAAGATACATGGTTTGCTCGCGACTCGCCTCATATCGGAAATAGAGGGATAGCACAATCTGTGGGAAACTGGTATTTCGATCGCGTTCAAGTTCAGGCCATTGGTTGTCCTTACCCTTGTGACAAAACCTGCCATAATTTGGTTTTCAACTGA 1248 0.4407 MFKRSNSFGAMRMLCWWGFGFIGLMFVKLVQGFENGNVTDMLYYNNNRPLMVGLTLIYGAASKGAVCLDGSLPGYHFNRGYGAGSNSWLVQLEGGGWCGNVRNCIYSKKTRHGSSAFMEKQIPFVGILSNKAEENPDFYNWNRIKIRYCDGASFTGDSQNERAGLFFRGQRIWLAAMEDLMLKGMRYAKQALLSGCSAGGLATILHCDEFREMFPRTTRVKCLSDAGLFLDAVDVSGHRSLRNFFGSVVALQGAQRNLPRTCTSRLNPILCFFPQHSIASVKAPLFLLNAAYDTWQIQASLAPPSADYHWNWYDCRKNYVRCSAPQMQYLQGFRNQMLRVVRRFSKSRKNGLFINSCFAHCQSERQDTWFARDSPHIGNRGIAQSVGNWYFDRVQVQAIGCPYPCDKTCHNLVFN 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181436g00011 415 PANTHER NOTUM-RELATED 36 411 IPR004963 GO:0016787
Stsc181436g00011 415 Pfam Pectinacetylesterase 47 394 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181436g00011 Stsc-Chr181436 60460 64188 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181436g00011 51 414 Carbohydrate Esterase AT1G57590 69.231 0.0 548
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181436g00011 K19882 - gmx:100791571 727.628