Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181436g00001 ATGGAGGTAGATGATGACTGGGAATTGACCGCAGAGGAACTCGATTCTCTTGAACGCGATGCTTTCCGGAAAATTGCTCAACTTCGTGACTCTTCCGCCCCGTCTTCTTCTTCTTCTTCTTCTTCTTCTCAACAATTCAATGTGCACCAACAGCAACAGCAACAGCAGCGTCACCATCCTCCAAAACCACCTTCTTCCAGCCACTCCCAACCCTTCCCACCAAACCCCATTTCCGATTCCCGTCCTCAAAGGGTTGATGCTTTGTCTCAAGGAGCTAGAGCATTACCCCCCTCTTTGAAACCAGGGACAAAAATAGATGAACCTTCTAAAGATCGGCCGAAGTTTTCTGTCAAATTTTTTCTTCATTCCAGTGGCCAAATTGCAGCGAAATTCCAATATGACCAGGTAGTAATTGCTGCTTTCCGAAGAATCCCTAGAGCTGCTTGGAATGCAAAAGAAAGGTTATGGATGTTCCCGCCTTCTTCCTTGTCAGAAGCAGAGAAGGTTCTTGGAGAATTACCTAATTATAATGTGCAGGTGGAGAAATTAGATCCCTTAGTGCACCGGGCATTCGTTTCTGCATCTGCTGTTCCAGATCTTCGAGATCGATACGACAGGATCCCTAGTTACATTGAATCAAAGCTTTTACCATTTCAGAGAGAAGGTGTAAGGTTTATTTTGCAACATGGAGGACGTGCCCTTTTAGCAGATGAAATGGGACTAGGGAAAACTTTGCAGGCCATTGCTGTAGCTTCATGCATTCAGGACTCATGGCCTGTTCTCGTACTTGCACCGTCGTCATTGCGCCTGCAATGGGCTTCTATGATTCAACAATGGCTGAATCTTCCTTCTTCGGATATACTT 864 0.456 MEVDDDWELTAEELDSLERDAFRKIAQLRDSSAPSSSSSSSSSQQFNVHQQQQQQQRHHPPKPPSSSHSQPFPPNPISDSRPQRVDALSQGARALPPSLKPGTKIDEPSKDRPKFSVKFFLHSSGQIAAKFQYDQVVIAAFRRIPRAAWNAKERLWMFPPSSLSEAEKVLGELPNYNVQVEKLDPLVHRAFVSASAVPDLRDRYDRIPSYIESKLLPFQREGVRFILQHGGRALLADEMGLGKTLQAIAVASCIQDSWPVLVLAPSSLRLQWASMIQQWLNLPSSDIL 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181436g00001 288 MobiDBLite consensus disorder prediction 25 87 - -
Stsc181436g00001 288 Pfam SNF2-related domain 233 281 IPR000330 GO:0005524|GO:0140658
Stsc181436g00001 288 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 186 281 IPR027417 -
Stsc181436g00001 288 ProSiteProfiles HARP domain profile. 109 184 IPR010003 -
Stsc181436g00001 288 PANTHER DNA ANNEALING HELICASE AND ENDONUCLEASE ZRANB3 FAMILY MEMBER 5 286 - -
Stsc181436g00001 288 MobiDBLite consensus disorder prediction 29 63 - -
Stsc181436g00001 288 Gene3D - 193 287 IPR038718 -
Stsc181436g00001 288 MobiDBLite consensus disorder prediction 64 78 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181436g00001 Stsc-Chr181436 146 3314 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SNF2 Stsc181436g00001 SNF2_N 2.4e-08 CL0023
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181436g00001 K14440 - gmx:100797654 395.586