Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181435g00009 ATGCCTCACAGAGCCACATACATTTTCCCGCGTCAATTTGGGGAGAGATCAGGGTTAGATGAGTCTTCGAAACAGTTATTGGATCACGAGAAGAAGAAGACACTTACCTCATGGGTCAAATCGGAATCCTCCTTCGGGATCGAAAGCGACTCTACTTCCAAGAAGTCCAAAAACGACGTCGTTGAACACGATGAAGATGTCGTTTACTCCAAGAACAACTCCGCCGTCTCCGAGTTATTCGCCGCCGTTGGTGGCCGCGGTCAGAAGCTCCGGAATAGGCAAAAGCATGTCGCCGGTGTGTTCAGTGACTGGCTGATCGAAAGGAAAGGAGATCGCGGATCTAGTCATGATCACCGGAGGTTCTCGTCGGAGGAGGAAGACGACGAGTCAGGGCTTCTGCTTCCTCCGGCGGCGGCGAAGGAAAGTGCCGGTGCCGGTGGAGCAGTGGACCAGAGCTTCGATCGGCAGGTGTCGCTTCCGAGAATGTCTAGCGGGAGCAGCTATGCCGGGAGCTTGTTCTCCGGTACAGCGACGGCGACGACGATTGACGGGAATTTCTTGAGCGAGGTGGTGAAGGAGGAAACGACGTCGGCGTCGAGTAGGAGGAGGAGTCAGCAGGAGGAGGAAAAAGATGAGCAAGAAAGAAGAGAGAAGGTTGTGGAGAAGTCAAAGGAGAGCTACATGCTGCAGGTGACAATGGCGAAGACTCTCACTTGCTTGGCAAATCTCGTGACGGAGCCAATTCTTGCTCCGGCCGCAGCCACTGAGACATGGGATTCCGAATCTGTTTCCTATCGTCTATGGGTGAGTGGGTGTTTGTCATACTCGGACAAGATATCGGATGGATTTTACAACATACTGGGGATGAATCCGTACCTATGGGTGATGTGCAATGAGGTGGAGGAAGGGAGAAAGATACCTAATTTGATGAAGCTGAAGGCAATTGAACCCGGTGAGACGAGTATAGAGGTGGTTCTTGTTGATAGACAAGAAGATTCTCGGTTGAAGGTGCTTCAAGATAAAGCGCAGGAGTTGTATTCTGCTTCAGAGAATACTCTCGTGTTGGTTGAACAGCTTGGAAAACTTGTTGCCATATATATGGGTGGTAAATATCCGGTGGAGCAAGGAGATCTGCACAAGCGGTGGAAGATGGTCAGCAGGAGGTTGAGGAATTTTCACAAGTGTGTTGTTCTTCCCATCGGCAGCTTATCTACTGGTCTTTGTAGGCATAGGGCCATTCTCTTCAAGAGATTGGCAGATTATATAGGTTTGCCATGTCGCATTGCTCGAGGCTGCAAGTATTGTGCTGCAGATCATAGATCCTCTTGCTTAGTCAAGATCAAAGATGACAATCAGCTCTCAAGGGAATATGTAGTAGACCTGGTTGGGGAACCAGGAAATGTCCATGGACCAGATTCCTCAATTAATGGAGCGTATCTTTCTTCAATGCCATCCCCATTTCAAATTTCCCATTTAAAAGAATCACAATCACCTTATATGGATGGCACAGCATGCTCTCAATCTCTGAGTTCCAACCACGTTTCTGTGATTCCTGAAAATCATCCATATTTAGGCTGTGAACAGGAAGATCAACAAATTAAAGAAGCTGAGTTGCTAAAAAATCACAACAGCTCCATTTATTCTTCATTTGAGCAATCCCAAGAAGAAATAGCACCACCTCCAATTCTTTTGGATTTAAACAAGAATAATGAGGCATGTGCACTCCTGGACTCAATTTTGCCTTCCATCCAAGAAGATGTTTCTAAAGCTCTTCATCCAGCTACTGAAGTAGCATTTCATGATTATGTTGAGCTTGGCAAANNNNNNNNNNCAATTATTGTAAAAGAAACCTACAAGAATGAGATCATCGTTACTGAAAGTTCTGCGGTAGAAACTAATTTTAAGCAATCTGTATTGTGCACATCCAGCCAATCAGAGCAGGTGCAGGTACACAATGGAATTGAAAACCTGGGTTGTTTACCACCTGGGAGTATTCCACGGTACCTGAATCTTGAGCCATCACTTGCAATGGATTGGCTTGAGATATCATGGGAGGATTTACGTATCAAAGAGCGTGTTGGCGCTGGCTCATTTGGGACAGTGCACCGTGCGGAATGGCATGGATCAGATGTTGCCGTCAAGGTTTTAACAGTCCAGGATTTCAGTGATGATAAATTAAAGGAGTTTCTGAGAGAGGTTGCAATAATGAAACGGGTTCGCCATCCAAATGTGGTGCTCTTCATGGGTGCTGTTACAAAACGCCCCCATCTATCAATTGTGACAGAATATTTACAAAGAGGTAGTTTATACCGACTAATACATAGGCCAACAGCTGGGGAACATTTGGATAGCAGGAGAAGATTACGGATGGCTTTAGATGTGGCTAAAGGGATCAATTATCTTCATTGTCTGAAACCTCCTATCGTGCACTGGGATCTCAAATCCCCAAACTTGTTAGTGGACAAATATTGGAACGTGAAGGTTTGTGATTTTGGATTGTCTAGATTTAAGGGAAATACTTTCATACCATCAAAGTCTGTTACTGGAACACCTGAATGGATGGCTCCAGAGTTTCTCCGCGGAGAACCTTCAAATGAGAAATCCGATGTATACAGTTTTGGAGTTATCCTATGGGAGCTTGTAACCATGCAACAACCATGGATGGGACTTAGCCCTGCCCAGGTGGTTGGAGCTGTTGGTTTCCAGAATAGGAGGCTTGCCGTTCCTCCAAACGTGTCCCCAGTATTGATCTCCCTCATGGAATCTTGTTGGGCTGATGACCCCGCTAAACGCCCATCTTTTGCTAGTATTGTTGTGTCGCTGAAGAAGCTGCTCAAGTCTCCAGCAGAGATGATAAAAATGGGTGAGACTTAA 2874 0.4603 MPHRATYIFPRQFGERSGLDESSKQLLDHEKKKTLTSWVKSESSFGIESDSTSKKSKNDVVEHDEDVVYSKNNSAVSELFAAVGGRGQKLRNRQKHVAGVFSDWLIERKGDRGSSHDHRRFSSEEEDDESGLLLPPAAAKESAGAGGAVDQSFDRQVSLPRMSSGSSYAGSLFSGTATATTIDGNFLSEVVKEETTSASSRRRSQQEEEKDEQERREKVVEKSKESYMLQVTMAKTLTCLANLVTEPILAPAAATETWDSESVSYRLWVSGCLSYSDKISDGFYNILGMNPYLWVMCNEVEEGRKIPNLMKLKAIEPGETSIEVVLVDRQEDSRLKVLQDKAQELYSASENTLVLVEQLGKLVAIYMGGKYPVEQGDLHKRWKMVSRRLRNFHKCVVLPIGSLSTGLCRHRAILFKRLADYIGLPCRIARGCKYCAADHRSSCLVKIKDDNQLSREYVVDLVGEPGNVHGPDSSINGAYLSSMPSPFQISHLKESQSPYMDGTACSQSLSSNHVSVIPENHPYLGCEQEDQQIKEAELLKNHNSSIYSSFEQSQEEIAPPPILLDLNKNNEACALLDSILPSIQEDVSKALHPATEVAFHDYVELGKXXXXIIVKETYKNEIIVTESSAVETNFKQSVLCTSSQSEQVQVHNGIENLGCLPPGSIPRYLNLEPSLAMDWLEISWEDLRIKERVGAGSFGTVHRAEWHGSDVAVKVLTVQDFSDDKLKEFLREVAIMKRVRHPNVVLFMGAVTKRPHLSIVTEYLQRGSLYRLIHRPTAGEHLDSRRRLRMALDVAKGINYLHCLKPPIVHWDLKSPNLLVDKYWNVKVCDFGLSRFKGNTFIPSKSVTGTPEWMAPEFLRGEPSNEKSDVYSFGVILWELVTMQQPWMGLSPAQVVGAVGFQNRRLAVPPNVSPVLISLMESCWADDPAKRPSFASIVVSLKKLLKSPAEMIKMGET 957
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181435g00009 957 MobiDBLite consensus disorder prediction 112 157 - -
Stsc181435g00009 957 SUPERFAMILY Protein kinase-like (PK-like) 666 938 IPR011009 -
Stsc181435g00009 957 MobiDBLite consensus disorder prediction 112 127 - -
Stsc181435g00009 957 Pfam Ethylene-responsive protein kinase Le-CTR1 260 468 - -
Stsc181435g00009 957 ProSitePatterns Protein kinases ATP-binding region signature. 693 714 IPR017441 GO:0005524
Stsc181435g00009 957 FunFam Serine/threonine-protein kinase CTR1 766 951 - -
Stsc181435g00009 957 Gene3D Phosphorylase Kinase; domain 1 680 765 - -
Stsc181435g00009 957 FunFam Serine/threonine-protein kinase isoform 1 677 765 - -
Stsc181435g00009 957 ProSitePatterns Serine/Threonine protein kinases active-site signature. 808 820 IPR008271 GO:0004672|GO:0006468
Stsc181435g00009 957 PRINTS Tyrosine kinase catalytic domain signature 868 890 IPR001245 GO:0004672|GO:0006468
Stsc181435g00009 957 PRINTS Tyrosine kinase catalytic domain signature 912 934 IPR001245 GO:0004672|GO:0006468
Stsc181435g00009 957 PRINTS Tyrosine kinase catalytic domain signature 802 820 IPR001245 GO:0004672|GO:0006468
Stsc181435g00009 957 PRINTS Tyrosine kinase catalytic domain signature 761 774 IPR001245 GO:0004672|GO:0006468
Stsc181435g00009 957 CDD STKc_MAP3K-like 693 941 - -
Stsc181435g00009 957 Pfam Protein tyrosine and serine/threonine kinase 687 940 IPR001245 GO:0004672|GO:0006468
Stsc181435g00009 957 MobiDBLite consensus disorder prediction 195 219 - -
Stsc181435g00009 957 Gene3D Transferase(Phosphotransferase) domain 1 766 953 - -
Stsc181435g00009 957 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 204 946 - -
Stsc181435g00009 957 Coils Coil 202 223 - -
Stsc181435g00009 957 MobiDBLite consensus disorder prediction 193 219 - -
Stsc181435g00009 957 ProSiteProfiles Protein kinase domain profile. 687 945 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc181435g00009 957 SMART serkin_6 687 945 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181435g00009 Stsc-Chr181435 65491 72672 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181435g00009 1 955 MAP Kinase Kinase Kinase AT4G24480 55.388 0.0 1030
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Stsc181435g00009 PK_Tyr_Ser-Thr 8.1e-64 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181435g00009 - - adu:107461056 1675.99