Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181435g00004 ATGGTGTGGCGCCACTTGGCCTACCGTCATGCCCTTGCTGAAAATCTTGAAGACGGTGCTGAACCTCTGGATGATGATAGTGACCTAGAATGCGAGCTGGAAGTATCGCCCCCAGTAAGTGCTGAATCTGTATCGGAAGCTGCAGCATGTGTGAAGGTAATGATTGCTTCTCGCACGCTGAGTGAATCAACCCCTAGTAGCTCAACAATTGAGGCTCCACTGACTATAACTGTTCCGGTTTGCCATTCATCTAAAACTCCTAGCGGAAGTTCACAGGCATCTAATTTGGTTCAAGGGACGAATGTTATTTTTCCAGTTACTGTTCAGAGACAAACACTGCCAACTGCACCATCAACGGATGGTATTGAGACCAAGGGATTAGGTGGTGGCAATATGGCTTCCAAAAGGAAGAGAAAAGCATGGTCAGAGGAAGAGGACATCCAGTTACGAGCAGCTGTTCAGAGATTTGGTGAAGGAAATTGGGCTAACATGGCCAAAGGAGATAACTTTCCTATTAAGAGAAGTCCTACTCAATTGGCTCAGAGGTGGAGCATTTTAAGAAAGAAAGATGGAACTGGCAATTCGGGAACCGTCGTGACAAGCACAACTTATACTACTGCTGAACAGCTGGCAACTCGACACTCCTTATCTTTAGCTCTTGATATGCCATTCAAGAAGTTAACTGCTCCTGGAACTATTGATCAAGCCAAGACATCCTTAATTTCAAGTAAAACCCAAGTGCAGCATAATGCTAAAGCAACAACAATACAAAGTAATTTAGCATCACATCAACAATCAATACTTAAAGGGAATCCCACTTCAAATCCTGGATTAAAAGCTACTGCAGTTGCTGTTGGTGCCAGAATTGTTTCTCCATCAAATATGGCATCACAAATAAAGGTTGCACAAGTAAGAAATGTTGTTCCCACAAGTATATCATTGGCAAAGCCATCCACTTCTCCCGGTTTGTCTTCTGAATTGACGGAGGTACAAGCTCACACTGGTTCAAGTGTTTCACATGTTCCCCTTCAGTCTGGACATGTTCCATCTCAGTCTGCACTCGCACCCTCCCAGTCAACTACTGCTATAACATCTCCGTCTTCTTCCTGTAGTACAGTTAAAGCTGCTGCCTCTGCTACTGTGTCTGTATTGCCTGAGAAGGACAAACTCGTTACCCCTGTGGTTAGTAAAGTTCCAATAAAGCAAGAAGCTAATACTGCAGATGAATTGCGAGATTCGAAGCCTAGCCCGGCACCAAAAGAGACTGTTAAAAATGATGAGAAATTAACTCAAGACAAGAGCATGAATATTTTGGTTAAAGAGAGTGTTCCTTCTATAAGTATAGGAAAGGAGGAAGTAACAGAAGATAAAGCAATGCCAAAAAATCAAGGAAAGGAAGAAGTAACAGAAGATAAAGCATTGCCAAAAAATCAAGTCAAGTCTGAAGATCAGGGAAACAAGGGGATCCATGATGATTTAGATAAAGAAAAGAGCAATAATTCAATTAATGGAAGCTGTCAGGATCAAAAGGTGGATGAGAAGCAAGAAAATTTGCAAAAAGTGGATGAGAAGCAAGAAAATTTGCAGAACTAG 1593 0.4225 MVWRHLAYRHALAENLEDGAEPLDDDSDLECELEVSPPVSAESVSEAAACVKVMIASRTLSESTPSSSTIEAPLTITVPVCHSSKTPSGSSQASNLVQGTNVIFPVTVQRQTLPTAPSTDGIETKGLGGGNMASKRKRKAWSEEEDIQLRAAVQRFGEGNWANMAKGDNFPIKRSPTQLAQRWSILRKKDGTGNSGTVVTSTTYTTAEQLATRHSLSLALDMPFKKLTAPGTIDQAKTSLISSKTQVQHNAKATTIQSNLASHQQSILKGNPTSNPGLKATAVAVGARIVSPSNMASQIKVAQVRNVVPTSISLAKPSTSPGLSSELTEVQAHTGSSVSHVPLQSGHVPSQSALAPSQSTTAITSPSSSCSTVKAAASATVSVLPEKDKLVTPVVSKVPIKQEANTADELRDSKPSPAPKETVKNDEKLTQDKSMNILVKESVPSISIGKEEVTEDKAMPKNQGKEEVTEDKALPKNQVKSEDQGNKGIHDDLDKEKSNNSINGSCQDQKVDEKQENLQKVDEKQENLQN 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181435g00004 530 MobiDBLite consensus disorder prediction 333 368 - -
Stsc181435g00004 530 SUPERFAMILY Homeodomain-like 136 189 IPR009057 -
Stsc181435g00004 530 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 133 191 IPR017930 -
Stsc181435g00004 530 Gene3D - 131 192 - -
Stsc181435g00004 530 MobiDBLite consensus disorder prediction 402 530 - -
Stsc181435g00004 530 MobiDBLite consensus disorder prediction 114 139 - -
Stsc181435g00004 530 CDD SANT_TRF 139 188 - -
Stsc181435g00004 530 Coils Coil 511 530 - -
Stsc181435g00004 530 ProSiteProfiles Myb-like domain profile. 133 187 IPR001005 -
Stsc181435g00004 530 MobiDBLite consensus disorder prediction 450 498 - -
Stsc181435g00004 530 SMART sant 137 189 IPR001005 -
Stsc181435g00004 530 MobiDBLite consensus disorder prediction 404 434 - -
Stsc181435g00004 530 Pfam Myb-like DNA-binding domain 138 183 IPR001005 -
Stsc181435g00004 530 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 1 524 - -
Stsc181435g00004 530 MobiDBLite consensus disorder prediction 509 530 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181435g00004 Stsc-Chr181435 12957 17347 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Stsc181435g00004 Myb_DNA-binding 1.9e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181435g00004 - - adu:107460964 707.597