Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181432g00001 ATGCAGAGTCATTTCCACCAGAACTTGGCCCAAGATTGCTCTAGGAGTGATCCACGTGTTACATATCCATCTGGTGTACATGACTTGGTTCCATCAACACCTCAAAATTCACAACAAATGTTGCACACACCCCAATTGGTTGCAGAGCCTCAAAATAATCTTAACTGTTTGACAGTTGGGGCACAATCCAAATCTTTAGTTCTAAATCAATGGCCTCAGTCACAAGATGCAAACCATATGCTTGGAAATATTTCACATGAGCAGCATGTCCACATGGATTTCCACCAAAGAATATCAGTGCAGGGTGAAGCTCAGTGCAATAATTTATCGTCAGATGGATCAATCATTGGTCAAGCAGTTGCCTCTAGAGCTTCAGTTGATGTGATAGACTCTGGAAGTGGGGTTAAAAAGGAACACAGGAATCAGCAGAGGTGGCTTTTATTTCTACTTCATGCCCGACGGTGTCCTGCCCCTGAAGGACAATGCCCAGAACGCTTCTGTTCTAATGCACAGAAGTTGTGTAAGCACATAGATGGATGTAAGAAGGTTCATTGTTCATACCCTCGGTGTCATCATACCAGGGTTTTGATTCATCATTTCATGAACTGCAAGGATCCTTGTTGCCCTGTTTGTGTTTTCGTAAAAAATTATCGACGTGCTGTGCAACTTAAGTCTCAGATTCGGTCGGAGCATGAATCAAGTTTGCCAGTTACAGTAAATGGGTCCTGTAAATCATATAATACTGTGGCCCCATTGGCTAGAATGATCTCTAAGCCTCCATTAGCTGTTGAAACTTCAGAAGATCTTCACCCATCTATAAAACGTATAAAGACTGAGCATTGCACCACACAGTCCATGAATCCTGAAAATGACAATTCTTCATCTGTTTCTGCAAATTGTGAATCTCTTATTTCTAGGGATACACAGTCCCTGGCCTATCCAAATGCTGATAAATCTATCTCAATTAAGTCTGAGATTGCTGAAGTTAAGGCTGAAGCTTCAGCACATTTGGTACATGAAAAGCTTAGTGAGATGAAAATGGATAGCAATCATTCAGATAGTAAAACATCGGGTGGTGAACCTGTCAAATATGATGAACCCGCTAATTTATGTAGGTCAGAACATGTTAAAACTGAGAAAGAAAGTACACAAGATAAGGAAGAAAATGTGATGCAGCCATCTGAAAATGCAGCAGGAACCAAGTCTGGCAAGCCAAAAATAAAGGGTGTCTCGTTAACTGAACTATTTACGCCTGAGCAAGTCAGGCAGCATATCACTGGCCTAAGGCAATGGGTTGGCCAAAGCAAATCAAAAGCAGAGAAGAACCAAGCAATGGAGCATTCGATGAGTGAGAATTCTTGTCAGTTGTGTGCTGTAGAGAAGCTTACTTTTGAACCCCCACCAATCTACTGCACAACCTGTGGTGTTCGTATTAAACGAAACAATATGTATTATACCACGGGTGCTGGTGATACGCGGCATTATTTTTGTATTCCATGCTATAATGATGCTCGCTCAGAGAACATTAACGTGGATGGGACTCCGATTCCTAAGTCAAGACTGGAAAAGAAGAAGAATGATGAAGAAACTGAGGAATGGTGGGTTCAATGTGATAAATGTGAAGCCTGGCAACATCAAATTTGTGCCTTATTTAACGGAAGAAGAAATGATGGTGGGCAAGCTGAGTACACTTGCCCAAATTGCTATATTCAAGAGGTAGAAAGAGGAGAGCGCAAGCCTTTACCCCAAAGTGCTGTTCTTGGAGCCAAAGATTTGCCGAGAACTATTCTTAGTGATCATATAGAACAGCGATTATTCAAAAGATTAAAGCAAGAGAGGCAAGAGAGGGCAAGGTTTCATGGAAAATCTTATGAAGAGGTTCCAGGGGCTGAATCGCTTGTTATAAGAGTTGTGTCATCTGTTGACAAGAAGTTAGAAGTGAAGCAGCGGTTTTTGGAGATTTTTCAGGAAGAAAATTACCCAACAGAATTCCCATATAAATCTAAGGTAATTTTGCTGTTTCAAAAGATTGAAGGTGTGGAAGTCTGTCTATTTGGCATGTATGTCCAAGAATTTGGATCTGAATGTCAGTTGCCCAACCAGCGTCGGGTGTATCTTTCATATCTCGACTCTGTGAAGTATTTTAGGCCTGAGGTCAAGGCAGTAACTGGAGAGGCTCTTAGGACATTTGTTTACCATGAAATTCTGATTGGATACCTTGAATATTGCAAGAAACGTGGTTTTACAAGCTGTTATATATGGGCCTGTCCACCCTTGAAGGGCGAAGACTATATTTTATATTGCCATCCAGAAATTCAGAAAACACCAAAATCTGATAAGCTTAGGGAATGGGCTAAGGTTACAGCTGCCAGACTCCCGTATTTTGATGGTGACTACTGGCCTGGGGCTGCCGAGGATCTGATTTATCAGCTTCGCCAAGAGGAAGATGGAAGGAAACAAAATAAGAAAGGAACAACTAAAAAAACTATAACAAAAAGGGCTTTAAAAGCATCTGGTCAGTCGGATCTCTCTGGCAATGCCTCAAAAGATCTGCTTCTCATGCACAAACTTGGTGAAACCATTTGCCCAATGAAGGAGGATTTTATCATGGTTCATCTACAGCATGCATGCAGTCATTGTTGTATTCTAATGGTGTCTGGCAACCGATGGGTTTGCAACCAGTGCAAGAATTTTCAGATTTGTGATAGGTGTTATGAAGTGGAATTAAAACGTGAAGAGAGAGAAAGACATCCTATTAATCAGAGGGAGAAACATACCCTTTATCCAATTGAAATCAATGATGTTCCAGTTGATACAAAAGACAAAGATGATATTCTTGAGAGTGAATTCTTTGATACTAGACAGGCATTTCTCAGTCTCTGCCAGGGAAATCATTATCAGTATGATACACTTAGGCGAGCCAAGCATTCATCTATGATGGTTCTATATCATCTTCATAATCCAACAGCTCCTGCATTTGTGACGACTTGTAATATATGCTATCTTGACATAGAAACTGGTCAAGGTTGGCGTTGTGAAGTTTGCCCAGAGTATGATGTATGTAATGCTTGTTATCAAAAGGATGGAGCCATTGATCATCCCCATAAGTTGACAAATCATCCATCAATGGCAGATCGTGATGCTCAGAACAAAGAAGCAAGGCAGTTTCGAGTGTCGCAGCTACGCAAAATGCTTGATCTACTTGTGCATGCATCCCAATGTCGTTCTGCACATTGCCAATACCCAAATTGCCGCAAAGTAAAGGGGCTTTTCCGCCATGGGATGCACTGCAAAACACGTGCTTCCGGAGGTTGTGTTCTTTGCAAGAAGATGTGGTATTTGCTTCAACTCCATGCTCGTGCCTGCAAAGAATCGGAGTGCCACGTGCCGCGTTGCAGGGATTTGAAAGAGCATTTAAGAAGATTGCAGCAACAATCTGATTCACGGCGTAGGGCTGCTGTAATGGAGATGATGAGGCAGAGAGCTGCAGAAGTTGCCAATAATGCTGGATGA 3513 0.4176 MQSHFHQNLAQDCSRSDPRVTYPSGVHDLVPSTPQNSQQMLHTPQLVAEPQNNLNCLTVGAQSKSLVLNQWPQSQDANHMLGNISHEQHVHMDFHQRISVQGEAQCNNLSSDGSIIGQAVASRASVDVIDSGSGVKKEHRNQQRWLLFLLHARRCPAPEGQCPERFCSNAQKLCKHIDGCKKVHCSYPRCHHTRVLIHHFMNCKDPCCPVCVFVKNYRRAVQLKSQIRSEHESSLPVTVNGSCKSYNTVAPLARMISKPPLAVETSEDLHPSIKRIKTEHCTTQSMNPENDNSSSVSANCESLISRDTQSLAYPNADKSISIKSEIAEVKAEASAHLVHEKLSEMKMDSNHSDSKTSGGEPVKYDEPANLCRSEHVKTEKESTQDKEENVMQPSENAAGTKSGKPKIKGVSLTELFTPEQVRQHITGLRQWVGQSKSKAEKNQAMEHSMSENSCQLCAVEKLTFEPPPIYCTTCGVRIKRNNMYYTTGAGDTRHYFCIPCYNDARSENINVDGTPIPKSRLEKKKNDEETEEWWVQCDKCEAWQHQICALFNGRRNDGGQAEYTCPNCYIQEVERGERKPLPQSAVLGAKDLPRTILSDHIEQRLFKRLKQERQERARFHGKSYEEVPGAESLVIRVVSSVDKKLEVKQRFLEIFQEENYPTEFPYKSKVILLFQKIEGVEVCLFGMYVQEFGSECQLPNQRRVYLSYLDSVKYFRPEVKAVTGEALRTFVYHEILIGYLEYCKKRGFTSCYIWACPPLKGEDYILYCHPEIQKTPKSDKLREWAKVTAARLPYFDGDYWPGAAEDLIYQLRQEEDGRKQNKKGTTKKTITKRALKASGQSDLSGNASKDLLLMHKLGETICPMKEDFIMVHLQHACSHCCILMVSGNRWVCNQCKNFQICDRCYEVELKREERERHPINQREKHTLYPIEINDVPVDTKDKDDILESEFFDTRQAFLSLCQGNHYQYDTLRRAKHSSMMVLYHLHNPTAPAFVTTCNICYLDIETGQGWRCEVCPEYDVCNACYQKDGAIDHPHKLTNHPSMADRDAQNKEARQFRVSQLRKMLDLLVHASQCRSAHCQYPNCRKVKGLFRHGMHCKTRASGGCVLCKKMWYLLQLHARACKESECHVPRCRDLKEHLRRLQQQSDSRRRAAVMEMMRQRAAEVANNAG 1170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181432g00001 1170 FunFam Histone acetyltransferase HAC1-like protein 1049 1166 - -
Stsc181432g00001 1170 Gene3D - 868 928 IPR043145 -
Stsc181432g00001 1170 MobiDBLite consensus disorder prediction 367 388 - -
Stsc181432g00001 1170 MobiDBLite consensus disorder prediction 279 301 - -
Stsc181432g00001 1170 Gene3D - 991 1043 IPR043145 -
Stsc181432g00001 1170 Pfam TAZ zinc finger 1062 1132 IPR000197 -
Stsc181432g00001 1170 Pfam TAZ zinc finger 143 211 IPR000197 -
Stsc181432g00001 1170 ProSitePatterns Zinc finger PHD-type signature. 497 568 IPR019786 -
Stsc181432g00001 1170 PANTHER CBP/P300-RELATED 31 786 IPR013178 GO:0004402|GO:0006355|GO:0016573
Stsc181432g00001 1170 Gene3D TAZ domain 131 219 IPR035898 -
Stsc181432g00001 1170 SUPERFAMILY TAZ domain 139 218 IPR035898 -
Stsc181432g00001 1170 Gene3D TAZ domain 1049 1166 IPR035898 -
Stsc181432g00001 1170 Pfam Histone acetylation protein 626 784 IPR013178 GO:0004402|GO:0006355|GO:0016573
Stsc181432g00001 1170 MobiDBLite consensus disorder prediction 1 18 - -
Stsc181432g00001 1170 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 521 569 IPR013083 -
Stsc181432g00001 1170 FunFam Histone acetyltransferase of the CBP family 12 868 927 - -
Stsc181432g00001 1170 ProSiteProfiles CBP/p300-type histone acetyltransferase (HAT) domain profile. 586 990 IPR031162 GO:0004402
Stsc181432g00001 1170 ProSiteProfiles Zinc finger TAZ-type profile. 133 214 IPR000197 -
Stsc181432g00001 1170 MobiDBLite consensus disorder prediction 342 405 - -
Stsc181432g00001 1170 SUPERFAMILY RING/U-box 852 925 - -
Stsc181432g00001 1170 SMART TAZ_2 1055 1133 IPR000197 -
Stsc181432g00001 1170 SMART TAZ_2 137 214 IPR000197 -
Stsc181432g00001 1170 ProSitePatterns Zinc finger ZZ-type signature. 997 1024 IPR000433 GO:0008270
Stsc181432g00001 1170 ProSiteProfiles Zinc finger TAZ-type profile. 1051 1135 IPR000197 -
Stsc181432g00001 1170 SUPERFAMILY TAZ domain 1054 1137 IPR035898 -
Stsc181432g00001 1170 SUPERFAMILY RING/U-box 973 1039 - -
Stsc181432g00001 1170 SMART KAT11_2 619 884 IPR013178 GO:0004402|GO:0006355|GO:0016573
Stsc181432g00001 1170 ProSiteProfiles Zinc finger ZZ-type profile. 872 935 IPR000433 GO:0008270
Stsc181432g00001 1170 Pfam Zinc finger, ZZ type 994 1035 IPR000433 GO:0008270
Stsc181432g00001 1170 Pfam PHD-finger 527 569 IPR019787 -
Stsc181432g00001 1170 CDD PHD_HAC_like 496 568 - -
Stsc181432g00001 1170 ProSiteProfiles Zinc finger ZZ-type profile. 992 1045 IPR000433 GO:0008270
Stsc181432g00001 1170 SMART zz_5 991 1036 IPR000433 GO:0008270
Stsc181432g00001 1170 SMART zz_5 871 915 IPR000433 GO:0008270
Stsc181432g00001 1170 FunFam Histone acetyltransferase HAC1 991 1042 - -
Stsc181432g00001 1170 SUPERFAMILY FYVE/PHD zinc finger 530 570 IPR011011 -
Stsc181432g00001 1170 MobiDBLite consensus disorder prediction 1 40 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181432g00001 Stsc-Chr181432 8593 16152 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TAZ Stsc181432g00001 HAT_KAT11 1.2e-26 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181432g00001 K04498 - gmx:100809207 2119.35