Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181431g00001 ATGGAAGTTAGTTCATCCATGGTGTTTATCATAATAAGCTTACTCTTCCTCATCTCTGTGCTATTGCCATGGATTACAAACAAGGGTAAGGGTGTCCATAAATTGCCACCTGGGCCATGGAAACTACCTCTCATAGGGAACCTCCATCAACTTGCAGGCTCATCACTTCCTCACCAGGCTCTCAGAAAACTATCAAACAAACACGGTCCACTCATGCACCTTCAACTTGGTCAGATTTCATCAGTGATTGTCTCATCCCCCAACATGGCCAGAGAAATCATGAAGACACACGATCTTGCTTTTGCAGATAGGCCTGAGTTCCTTCTTTCCAAGATCATAGCCTATGGATCAGCAGACATTGCATTCTCTCCCTATGGTGAATTCTGGAGACAGATGAGAAAGATATGCACAGTTGAACTTCTTAGTTCAAAGAAGGTCCAGTCTTTGTTCTATATCCGACAAGAGGAGGTAGCTAACATGCTAGAAACAATTCTCAAATCCGCCGGTGCAGCCATCGATCTCAGTAAAATGATTGACAATCTCATAAGCACTGTGGTTTCTAGAGCTGCGTTTGGCAACTTATCCGAAGACCATGAACAGTTTGTGTCCCTTGTGAAGAAGATGGCAGAGGCAGGCGATGGATTTGCCATTTCGGATTTGTTTCCTTCCTTGAAACCTCTGCATTTCATCACTGGTTTTGAAGCCAAACTGAAGAAGATGCACGTCAAGATCGACATGATCTTAGATAAGATCATAAAGGAGAATGAAGAAAGAAAAGGGGAAGACACAAAGCAGGAGAATCTTGTTGAGGTTCTTTTAAGAGTCCTACATAGTGGCACCCTTGACACCCAAATTACAATGAACAATGTCAAAGCAATCATTTTGGACATATTTGCTGCTGGAACAGATACTTCAGGAGTAGCTATAGAGTGGGTTATGTCGGAATTGATGAAAAGCCCCAGGGCTATGAAGAAGGCACAGGCTGAGATTCGACAAGCTTTGAGAGGAAAGCAAACAATCCAGGAGGCAGATGTATCAGAGCTTCCCTACTTGAAGGCTGTGATCAGCGAAACAATGAGGTTACATCCTCCTCTTCCTCTGTTGCTTCCAAGACAAGCTAGAGAAGACTGCACCATCCATGGATATCATATACCCATCAATACTAAAGTCATGGTAAATGCATACGCGCTCGGAAGAGATCCAGATTACTGGTATGATGCGGAAACCTTCCTGCCTGAAAGGTTTCTGGACAATCCTATGGATTTCAAGGGGACAAACTTGGAGTATGTTCCTTTTGGAGCAGGAAGGAGAATGTGTCCAGGACTTAACTTTGGTTTAGCCAACGTGGAGTTTGCTGTAGCTATGCTACTCTACCGCTTCAACTGGGAACTCCCTAATGGAATGAAGGCAGAGGATCTGGATATGAATGAAGTACAAGGAGCCGTGGTTGGAAGGAAAAACAACCTTTACTTGATTCCTACACCTTACCATATATAA 1497 0.4362 MEVSSSMVFIIISLLFLISVLLPWITNKGKGVHKLPPGPWKLPLIGNLHQLAGSSLPHQALRKLSNKHGPLMHLQLGQISSVIVSSPNMAREIMKTHDLAFADRPEFLLSKIIAYGSADIAFSPYGEFWRQMRKICTVELLSSKKVQSLFYIRQEEVANMLETILKSAGAAIDLSKMIDNLISTVVSRAAFGNLSEDHEQFVSLVKKMAEAGDGFAISDLFPSLKPLHFITGFEAKLKKMHVKIDMILDKIIKENEERKGEDTKQENLVEVLLRVLHSGTLDTQITMNNVKAIILDIFAAGTDTSGVAIEWVMSELMKSPRAMKKAQAEIRQALRGKQTIQEADVSELPYLKAVISETMRLHPPLPLLLPRQAREDCTIHGYHIPINTKVMVNAYALGRDPDYWYDAETFLPERFLDNPMDFKGTNLEYVPFGAGRRMCPGLNFGLANVEFAVAMLLYRFNWELPNGMKAEDLDMNEVQGAVVGRKNNLYLIPTPYHI 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181431g00001 498 Gene3D Cytochrome P450 29 491 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181431g00001 498 PRINTS E-class P450 group I signature 289 306 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181431g00001 498 PRINTS E-class P450 group I signature 65 84 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181431g00001 498 PRINTS E-class P450 group I signature 352 370 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181431g00001 498 PRINTS E-class P450 group I signature 181 199 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181431g00001 498 PRINTS E-class P450 group I signature 439 462 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181431g00001 498 PRINTS E-class P450 group I signature 89 110 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181431g00001 498 PRINTS E-class P450 group I signature 393 417 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181431g00001 498 PRINTS E-class P450 group I signature 309 335 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181431g00001 498 PRINTS E-class P450 group I signature 429 439 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181431g00001 498 SUPERFAMILY Cytochrome P450 34 495 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181431g00001 498 Pfam Cytochrome P450 36 487 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181431g00001 498 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 432 441 IPR017972 GO:0005506|GO:0016705
Stsc181431g00001 498 FunFam Cytochrome P450 99A2 25 494 - -
Stsc181431g00001 498 Coils Coil 323 343 - -
Stsc181431g00001 498 PANTHER OS08G0105600 PROTEIN 60 497 - -
Stsc181431g00001 498 CDD CYP71-like 67 489 - -
Stsc181431g00001 498 PRINTS P450 superfamily signature 300 317 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181431g00001 498 PRINTS P450 superfamily signature 430 439 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181431g00001 498 PRINTS P450 superfamily signature 353 364 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181431g00001 Stsc-Chr181431 3834 5608 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181431g00001 11 496 Cytochrome P450 AT3G26300 42.137 3.49e-140 411
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181431g00001 - - gmx:100800554 634.409