Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181428g00011 ATGGAAGCATCACAAGTTGAATTTGAGCATCCTAGGAAGGCATTTGGATGGGCAGCAAGAGATTCTTCTGGATTGCTCTCCCCTTTCAATTTCTCTAGAAGGCATGAAGTGATTGGCATAGTTGCAGAGGTGGGAAGCAAGGTAGAAAAGTACAAGGTTGGAGACAAAGTGGGCGTGGGATACTTTGTAGAATCTTGTCGCTCCTGCCAAAATTGTATTGATAATCTTGAAAATTATTGTCCAAAACACATATTAACACAAGGTGACAAACACATTGATGGAACCACAACCTATGGAGGCTACTCTGATTCAATGGTTGTTGATGAACACTTTGTGATTCGAATTCCTGAAGGACTACCTCTTGATGCTGCTGCTCCTCTTCTTTGTGCTGGGGTTACAGTTTACAGCCCTCTAAAATATTATGGGCTTGATAAGCCTGGTTTGCATGTGGGTGTAGTTGGGCTTGGTGGGCTTGGCCATATGGCAGTCAAGTTTGCTAAAGCCCATGGGCTTAAGGTCACTGTCATTAGTACTTCACCCAACAAAAAAGAGGAAGCAATAAAGAATTTGGGAGCTGATTCATTTTTGGTTAGTCGTGATCCAGACCAAATGGAGGCTGCAAAAGAAACTCTGGATGGCATCATTGACACAGTTTCTGCTGATCATTCCATTGTACCTCTAATTGGATTATTGAAGTCTCATGGAAAACTTGTATTGATTGGGGCAATTGAGAAGCCTCTGGAATTGCCTGCCTTTCCTTTGATTTTGGGAAGAAAACTTGTTGGTGGTACTCTGGTCGGAGGGTTGAAAGAGACACAAGAAATGATTGATTTTGCCGCAAAACATAATGTGAAGCCTGAGATTGAAGTTGTTCCAATGGATTATGTTAACATTGCAATGGAACGTCTTGCTAAAGCTGATGTCAAGTATCGCTTCGTAATTGATGTTGCAAACACATTCAAACCAACCTCTTGA 975 0.4185 MEASQVEFEHPRKAFGWAARDSSGLLSPFNFSRRHEVIGIVAEVGSKVEKYKVGDKVGVGYFVESCRSCQNCIDNLENYCPKHILTQGDKHIDGTTTYGGYSDSMVVDEHFVIRIPEGLPLDAAAPLLCAGVTVYSPLKYYGLDKPGLHVGVVGLGGLGHMAVKFAKAHGLKVTVISTSPNKKEEAIKNLGADSFLVSRDPDQMEAAKETLDGIIDTVSADHSIVPLIGLLKSHGKLVLIGAIEKPLELPAFPLILGRKLVGGTLVGGLKETQEMIDFAAKHNVKPEIEVVPMDYVNIAMERLAKADVKYRFVIDVANTFKPTS 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181428g00011 324 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 119 285 IPR036291 -
Stsc181428g00011 324 Gene3D - 130 286 - -
Stsc181428g00011 324 SUPERFAMILY GroES-like 30 147 IPR011032 -
Stsc181428g00011 324 PANTHER ALDEHYDE REDUCTASE 35 319 IPR047109 GO:0016616
Stsc181428g00011 324 FunFam Cinnamyl alcohol dehydrogenase 130 286 - -
Stsc181428g00011 324 Pfam Alcohol dehydrogenase GroES-like domain 32 114 IPR013154 -
Stsc181428g00011 324 Gene3D - 34 316 - -
Stsc181428g00011 324 Pfam Zinc-binding dehydrogenase 157 280 IPR013149 -
Stsc181428g00011 324 SMART PKS_ER_names_mod 4 314 IPR020843 GO:0016491
Stsc181428g00011 324 FunFam Putative cinnamyl alcohol dehydrogenase 6 287 316 - -
Stsc181428g00011 324 CDD CAD1 15 315 IPR047109 GO:0016616
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181428g00011 Stsc-Chr181428 59435 62559 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181428g00011 12 323 Monolignol Biosynthesis Gene Families AT4G37990 60.857 5.50e-137 391
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181428g00011 K23232 - gmx:100816901 490.73