Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181428g00001 CCTGGCTTGAATATTGGTGTAGTTGGTCTTGGCGGGTTAGGACACGTGGCAGTCAAATTTGCCAAAGCTTTTGGTGCTAAAGTCACTGTTATCAGTACCTCACCACACAAAAAGGAGGAAGCAATTCAACATTTGGGTGCTGATTCATTTTTGTTAAGTCGCGACCAAGATCAGATGCAGGGTGCAAAGGAAGGCTTGGATGGTATCATAGACACAATTTCTGCTGTTCATTCTTTGGTGCCTCTTATTGGTTTATTGAAGTCTCATGGCAAACTTGTAATGGTTGGAGCACCTGAGAAGCCTCTAGAACTTCCAGTCATTCCTTTACTCATGGGGAGAAAGCTAGTAGCTGGTAGTGGCATTGGAGGGTTAAAAGAGACTCAGGAGATGATTGATTTTGCTGCAAAACACAATGTGAGACCTGATATCGAAGTCATTCCTATTGATTATGTCAACACAGCAATGGAGCGCCTCCTTAAATCCGATGTCAAATATCGCTTCGTCATTGACATTGGAAATACTCTGAAACAAATCTCTTAA 540 0.4241 PGLNIGVVGLGGLGHVAVKFAKAFGAKVTVISTSPHKKEEAIQHLGADSFLLSRDQDQMQGAKEGLDGIIDTISAVHSLVPLIGLLKSHGKLVMVGAPEKPLELPVIPLLMGRKLVAGSGIGGLKETQEMIDFAAKHNVRPDIEVIPIDYVNTAMERLLKSDVKYRFVIDIGNTLKQIS 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181428g00001 179 Gene3D - 142 171 - -
Stsc181428g00001 179 FunFam Cinnamyl alcohol dehydrogenase 1 141 - -
Stsc181428g00001 179 Gene3D - 1 141 - -
Stsc181428g00001 179 FunFam Putative cinnamyl alcohol dehydrogenase 6 142 171 - -
Stsc181428g00001 179 PANTHER ALDEHYDE REDUCTASE 1 174 IPR047109 GO:0016616
Stsc181428g00001 179 Pfam Zinc-binding dehydrogenase 12 135 IPR013149 -
Stsc181428g00001 179 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 1 139 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181428g00001 Stsc-Chr181428 1 886 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181428g00001 1 176 Monolignol Biosynthesis Gene Families AT4G37990 72.159 9.99e-70 214
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181428g00001 K23232 - gmx:100816901 298.13