Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181427g00008 ATGGTAGACACTGCTGCTCGTGATTCTGGGATGAGCTTCGACACTCTCAATTCAGCTCAGAGGACCTCCATGAGCAGTGACAGCATCTGCAGCACCAGCTTCAGCCGTCTCTCCTTCGACCTCCTACCCACCTCTCCTGACACCCTCTCCGTCAAGCCTCACCGCTCCTCTGACTTTGCATACTCCGCCATCCGCTCCGCCACCTTCCGCCGCAAGTCCGCCCTCACCTTCCGCGACTTTCACCTCCTCCGCCGTATCGGCGCCGGTGACATCGGCACCGTCTACCTCTGCCGCCTCCGTGACTCGGCTGGCGTCGCCGCCTCGGATGAGTTTCCCTCGGCGGAGTACGACAACTGGAACAGCAACGGGGAGGATGAATCCCCCGGGTGCTTGTACGCGATGAAGGTGGTGGACAAGGAGGCGGTGGCGATGAAGAACAAATCGCAGAGAGCGGAAATGGAGAGGAAGATCCTGAAGATGCTGGACCACCCGTTCTTGCCTACTCTGTACGCGGAGTTTGAAGCGTCTCATTTTTCTTGCATTGTGATGGAGTTTTGCCCCGGCGGCGACCTGCACTCTCTGCGGCACAAACAGCCACAGAAACGGTTCCCTGTGTCGTCGGCAAGGTTTTACGGTGCGGAGGTACTGGTTGCGTTGGAGTACCTGCACATGCTGGGAATCATCTACAGGGATCTAAAGCCCGAAAACGTGTTGGTCAGATCTGACGGTCACATCATGCTCTCCGATTTCGATCTCTCCTTATGCTCCCATGCAATCCCAGCCGTTGAACCCCATCGCACCTTCCTCGTGCCCAACACCAACACTCGCACGCCACTATTCTCCTGCCTCTTCCGTTCCACCAAGGTTCAGACCCTCAACCCCAACCGTCTCTTCGTCGCCGAGCCTGTAGGAGCACGCTCCTCCTCCTTCGTCGGAACTCATGAGTACGTTTCGCCCGAGGTGGCCTCCGGGAACTCCCACGGAAACGCCGTCGACTGGTGGTCCTTCGGGATCTTCCTGTACGAGCTCCTCTACGGTTACACGCCGTTTGCTGCAGCATCCAACGATGTGACACTGCGCAACATCATAAAGAAGCCGTTGGGCTTTCCCACAGCCGCGGCGTCCAGCACGCTTGAGCAGCACGCGCGGGACCTCATAAGGGGGTTGCTCCACAAGGACCCCACTCGAAGACTGGGGTCGAAGCGGGGCGCTGCTGACGTGAAGAATCACCCTTTCTTCGGAGGGATGAACCTGGCTCTCATAAGGATGATGAATCCGCCGGAAGTGCCATACCTGAGGAGGCAGAAAACGGTTCCAAGGAGTAGGAGTAGTAGGCGGGTGCAAGCAACGGCGTCGTTTGATTGCTTTTGA 1371 0.5806 MVDTAARDSGMSFDTLNSAQRTSMSSDSICSTSFSRLSFDLLPTSPDTLSVKPHRSSDFAYSAIRSATFRRKSALTFRDFHLLRRIGAGDIGTVYLCRLRDSAGVAASDEFPSAEYDNWNSNGEDESPGCLYAMKVVDKEAVAMKNKSQRAEMERKILKMLDHPFLPTLYAEFEASHFSCIVMEFCPGGDLHSLRHKQPQKRFPVSSARFYGAEVLVALEYLHMLGIIYRDLKPENVLVRSDGHIMLSDFDLSLCSHAIPAVEPHRTFLVPNTNTRTPLFSCLFRSTKVQTLNPNRLFVAEPVGARSSSFVGTHEYVSPEVASGNSHGNAVDWWSFGIFLYELLYGYTPFAAASNDVTLRNIIKKPLGFPTAAASSTLEQHARDLIRGLLHKDPTRRLGSKRGAADVKNHPFFGGMNLALIRMMNPPEVPYLRRQKTVPRSRSSRRVQATASFDCF 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181427g00008 456 Pfam Protein kinase domain 307 413 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc181427g00008 456 Pfam Protein kinase domain 127 253 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc181427g00008 456 SUPERFAMILY Protein kinase-like (PK-like) 62 440 IPR011009 -
Stsc181427g00008 456 ProSiteProfiles Protein kinase domain profile. 80 413 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc181427g00008 456 FunFam protein kinase PINOID 2 78 185 - -
Stsc181427g00008 456 SMART serkin_6 80 413 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc181427g00008 456 ProSitePatterns Serine/Threonine protein kinases active-site signature. 227 239 IPR008271 GO:0004672|GO:0006468
Stsc181427g00008 456 FunFam protein kinase PINOID 186 254 - -
Stsc181427g00008 456 FunFam serine/threonine-protein kinase D6PK-like 305 431 - -
Stsc181427g00008 456 CDD STKc_phototropin_like 78 430 - -
Stsc181427g00008 456 PANTHER FLIPPASE KINASE 1-RELATED 22 433 - -
Stsc181427g00008 456 Gene3D Phosphorylase Kinase; domain 1 68 108 - -
Stsc181427g00008 456 Gene3D Transferase(Phosphotransferase) domain 1 190 254 - -
Stsc181427g00008 456 Gene3D Transferase(Phosphotransferase) domain 1 306 431 - -
Stsc181427g00008 456 Gene3D Phosphorylase Kinase; domain 1 126 189 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181427g00008 Stsc-Chr181427 28050 29914 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181427g00008 8 456 AGC Kinase Gene Family AT2G34650 62.121 0.0 552
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Stsc181427g00008 Pkinase 4.1e-29 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181427g00008 - - qsa:O6P43_013066 627.861