Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181425g00008 ATGGAAGGGAATTTGTCACAGGGTGGTGCTGTTCAAGGAGGAGCTTCTTTTGGTGGTTTTGATTTGCCTGGTCCAATGCGAGTTCATCACCAATCCCAGTGTGTGCCGCATACCATCATCCAGCATCAAACTCTTCCTTGCCATGGGTCTGCTGGACAATCCTCAACTTTTCCCCTTACAACGGGGACCATGTGTGATCAGACTATGTCAATGGCTGAGTTTGATAAAACAGACAGAAGCAAAAACTCTGCGAGTGATGAAGATGAGCTGAGTTTGACCGAGGATGGTGGTGATGGTCATCATGAAGCAGGCAGAACGAAGAAGGGATCGCCTTGGCAGCGGGTCAAATGGACTGATAAGATGGTGAAGCTTATGATAACAGCTGTTTCGTATATAGGCGAGGATTCAACTTCTGATGTTGCCAGAAGAAGAAAAGTTGTGGTCTTTCAAAAGAAGGGCAAATGGAAGACTATTTCCAAGGTCATGGCTGAAAGGGGTTATCATGTTTCCCCTCAGCAGTGTGAGGATAAATTCAATGATCTGAATAAACGCTATAAAAGGCTTAATGATATGCTTGGCAGGGGCACTTCTTGTCAGGTTGTTGAAAATCCTGCGCTGTTAGATTTAATTGACTATCTTTCTGAGAAAGAAAAAGATGATGTTCGAAAGATACTAAGCTCAAAACAGCTTTTTTATGAAGAGATGTGTTCTTACCATAATAATAACCGATTGCATTTACCCCATGACCTTGCATTGCAACGATCACTGCAGCAAGCTCTCCGAAGTAGAGATGATCATGAAGAAGATGATCAAGATATGGAAACTGATGATCATGATGAATTTGAAGAGAATCATGCTTCCCATGGGGATTGCAGAGGAATCCACGGGGTATTAGTGGGACCTATTAGGAAATTGAAACAAGGACAAGGTCAAGAAGACTCTGCTACTTTTGGGAATTCTTTAAATTGTCAAGAATATAACAAAAGTTTTCAGACGCGAATGGTCCAATCAGACGCGAATCAAGCTTTACCTGAAAACTTGAGAGCTGCATGGTTACAGAATCAATGGGTTGAATCTCGCACAATTCAGTTAGAAGAACAGAAACTACAGATACAGATTGAGATGTTGGAAGTAGAGAAGCAGAGATTCAAGTGGCAGAAGTTCAGTAAGAAGAAAGATCGGGAGCTGGAGCAGTTGAAGCTGGAGAATGAAAGGATTAAGCTTGAGAACGAACGTCTTGCTTTAGAGCTGAAGCGAAAGGAATTGGGTGCTGGTCTAAACTAG 1284 0.4245 MEGNLSQGGAVQGGASFGGFDLPGPMRVHHQSQCVPHTIIQHQTLPCHGSAGQSSTFPLTTGTMCDQTMSMAEFDKTDRSKNSASDEDELSLTEDGGDGHHEAGRTKKGSPWQRVKWTDKMVKLMITAVSYIGEDSTSDVARRRKVVVFQKKGKWKTISKVMAERGYHVSPQQCEDKFNDLNKRYKRLNDMLGRGTSCQVVENPALLDLIDYLSEKEKDDVRKILSSKQLFYEEMCSYHNNNRLHLPHDLALQRSLQQALRSRDDHEEDDQDMETDDHDEFEENHASHGDCRGIHGVLVGPIRKLKQGQGQEDSATFGNSLNCQEYNKSFQTRMVQSDANQALPENLRAAWLQNQWVESRTIQLEEQKLQIQIEMLEVEKQRFKWQKFSKKKDRELEQLKLENERIKLENERLALELKRKELGAGLN 427
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181425g00008 427 Pfam Myb/SANT-like DNA-binding domain 114 238 IPR044822 -
Stsc181425g00008 427 PANTHER F16F4.11 PROTEIN-RELATED 1 424 - -
Stsc181425g00008 427 Coils Coil 389 421 - -
Stsc181425g00008 427 Gene3D - 117 187 - -
Stsc181425g00008 427 MobiDBLite consensus disorder prediction 256 289 - -
Stsc181425g00008 427 MobiDBLite consensus disorder prediction 74 112 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181425g00008 Stsc-Chr181425 74955 77358 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Stsc181425g00008 Myb_DNA-bind_4 2.4e-23 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181425g00008 - - gmx:100812134 612.068