Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181422g00003 ATGAGACCGTCACCGCCACGTTCCTGCGTCGCGCCGACTCGTGCTCGCCACAATCACACACACCGTCGTCTCTCTGCTTCCGTCTCTCACTGCCCTTTCCTGCATCGTGCCGCCGGTGCCACCACCTTCAAGCCCTCAAGGATCTTCGAAGTTCATTGTTCTCTCTCGTCTTCTTCCTTCGAATCGGCGAATCATCCTCAGCAGATCTTCAAAGCTCGTCGCCGACTCGTGCTCTCCTCGTCGCTGTTTCATATCTGCCTCGTCGCCGGTTCATCTCTGCTTGCAAGGGTTTCGGCTCGCGGACCAACCTTCCTGTTCCTAAACTTTGATGCTTCATTCTCTTGTGCACAAACTCTAAGTGCAAGGTTATTTATTATTGTAAGGCCACACATAAAGCATTGCAGCAACCCAACTTATGGGCTAGTCAAGAATCCTTCAGATCCATTACAAGGCGCACTACTTGTCTATGATATAACCAGTTTCTTCAAAGAATGTCCTCATCCTGATGAGAAGCAAAGGTTGGATCTTAGTAAGAGGCTTGTCTTGGAGAATAAGCAAGTCAAATTCTGA 570 0.493 MRPSPPRSCVAPTRARHNHTHRRLSASVSHCPFLHRAAGATTFKPSRIFEVHCSLSSSSFESANHPQQIFKARRRLVLSSSLFHICLVAGSSLLARVSARGPTFLFLNFDASFSCAQTLSARLFIIVRPHIKHCSNPTYGLVKNPSDPLQGALLVYDITSFFKECPHPDEKQRLDLSKRLVLENKQVKF 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181422g00003 189 CDD homeodomain 160 188 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181422g00003 Stsc-Chr181422 28387 30749 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181422g00003 155 189 Homeobox Transcription Factor Family AT4G00730 71.429 2.00e-11 60.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181422g00003 K09338 - gmx:100794400 65.0846