Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181421g00015 ATGGTTGGAAAGCATAGTAGGTTATGGCTCTGCAAAGATATAGTCGAAGTTTTAGAAAACAATGGAGGGACCGGTGCCATTGAAATCATACATTTGGAATTTCCCTTGCTGAAAAGGAAAGAGGAGGAAGATCCATTGAAGGAAGAGAAAAATGAAGATGTAGAGATAAAATGGGATGGAACTGCATTTAAAGAGATGAAAAATCTGAAAACCCTTATCATAAAAAATGGCTGCTTTTCCAAAGGTCTCAAATATCTTCCAAATAGTTTAAGAGTATTAGAATGGTGGAGATATCCTTCAAATTCTTTTCCATATGATTTTCAACCAAAAGAGCTTTCCATACTAAAGCTACCTCATAATCTTCATGTGTCATCCAACTTGGATAGCTTATCCAAGAAGTTGGTGACCTTGAAAATCTTGAATCTTGACCACATTGATTCTTTGAAAGAGATACCTGACATTTCTAGCCTTCAAATTCTACAAGAACGTTCGTTTAAAGAGTGTAGCAATTTAGTTACAGTTCACAATTCAGTAGGATTTTTTAATAAGCTTGAAATATTGGATGCTGAAAATTGCCCGAAGCTAAGTAGTTTTCCGCCTGTTATCCATTTGCCCTCACTGGAAGTACTCAAGCTAAATGGTTGCTCAAACCTTGAGAATTTTCCAGAAATAGCAGAAAAGATTGCAAAGTTGACACGGCTTGATTTGAGGGGCACTGGCATAACATATTTGCCATATTCATTATGTAACCTTTCTGGGTTGTGCTGTTTGTTAATGTGGTCTCATGAAATGTGTAACATACTAAGTGTGATTGTGATGATGCCGGAACTGTCTCATTGTTATACCTGGGGAGTTGGGAATGAGAGGTGGGAAATGGGGCTTAATGGATTACTGACCCACTCCCTCCCCTCTTCAAATATAACATGTCTTTTTCTTAAAAACGTGAAGCTGAAAGATGACTTTTTTCTACTAGCTGTTGTATGGTTCCCTAATGTGGACTTTTTAGAGCTTAGTGGCAATGATTTCACAATCATTCCTGAATGCATCCAAGAATTTCGATTTCTGTGGTACCTCAATTTGGATAATTGCCAGAGTCTTCAGGAGATTACAGGGATTCCGCCAAACTTAAAATGGTTTTCAGCAAAAAACTGCAAATTAATGAGTCCTGGGGGATCAAGCGTGTTGCTCAATCAGGTTTTGTAA 1203 0.3766 MVGKHSRLWLCKDIVEVLENNGGTGAIEIIHLEFPLLKRKEEEDPLKEEKNEDVEIKWDGTAFKEMKNLKTLIIKNGCFSKGLKYLPNSLRVLEWWRYPSNSFPYDFQPKELSILKLPHNLHVSSNLDSLSKKLVTLKILNLDHIDSLKEIPDISSLQILQERSFKECSNLVTVHNSVGFFNKLEILDAENCPKLSSFPPVIHLPSLEVLKLNGCSNLENFPEIAEKIAKLTRLDLRGTGITYLPYSLCNLSGLCCLLMWSHEMCNILSVIVMMPELSHCYTWGVGNERWEMGLNGLLTHSLPSSNITCLFLKNVKLKDDFFLLAVVWFPNVDFLELSGNDFTIIPECIQEFRFLWYLNLDNCQSLQEITGIPPNLKWFSAKNCKLMSPGGSSVLLNQVL 400
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Stsc181421g00015 400 SUPERFAMILY L domain-like 59 389 - -
Stsc181421g00015 400 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 3 371 IPR044974 GO:0006952
Stsc181421g00015 400 Gene3D Ribonuclease Inhibitor 55 228 IPR032675 -
Stsc181421g00015 400 Gene3D Ribonuclease Inhibitor 229 391 IPR032675 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Stsc181421g00015 Stsc-Chr181421 62333 63745 Proximal
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181421g00015 3 251 WRKY Transcription Factor Family AT4G12020 34.221 1.53e-26 110
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181421g00015 - - ahf:112751488 454.136