Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181421g00014 ATGGCTGAGCATGAGAAGAGATTTAAGAATGACTTGAACAAGGTGCAAAAATGGAAGGAGGCTCTGCATCAAGTGGCTAATTTGTCAGGCTATCATTTCAAATACAGGGATGGATATGAACATGTGTTTATCGGAAACATCGTGGAAAACATATCAAAAAAGATTAGACGAAATGCAGCTTTGCCGGTTGCTGATCACCCAGTTGGATTGGAGTCACCAGTGTCAGAGGTAGTTTTGCTTTTAGATGTTGAATCTGATGCTGGAGTTCACATGGTAGGAATATATGGCATTGGTGGAATAGGAAAAACAACACTTGCTCTTGCTGTTTATAACTTAATTGCTGACAATTTTGAAAGTGTATGTTTTCTAGAAAATGTGAGAGAAAACTCAAGTAAATATGGGTTGGTACATCTTCAAAATATTCTTCTTTGTAAGATATTAGGGAAGGAGGGAATCCAGATATTCGGTGTTAAAGAAGGAACTTCACAGATACAATATAGACTCTGCCAAAAGAAAGTTCTTTTGGTTTTGGATGATGTTGATGAGCATGAGCAGTTGAAAGCTGTTGCTGGAAAATCTGATTGGTTTGGTCCTGGTAGCAGAATCATCATTACAACACGGGACAAACATTTGCTGACACTTCATGGCGTTGAAAGGACATATGAGGTACAAGGTTTAAATGAGAATGAATCGTTAGATTTGCTTAATTGGAAAGCTTTTAAAACTGATATTGTTAACCCGAAGTACATGGATGTTTTAATCGTGCAATAA 771 0.3735 MAEHEKRFKNDLNKVQKWKEALHQVANLSGYHFKYRDGYEHVFIGNIVENISKKIRRNAALPVADHPVGLESPVSEVVLLLDVESDAGVHMVGIYGIGGIGKTTLALAVYNLIADNFESVCFLENVRENSSKYGLVHLQNILLCKILGKEGIQIFGVKEGTSQIQYRLCQKKVLLVLDDVDEHEQLKAVAGKSDWFGPGSRIIITTRDKHLLTLHGVERTYEVQGLNENESLDLLNWKAFKTDIVNPKYMDVLIVQ 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181421g00014 256 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 14 243 IPR044974 GO:0006952
Stsc181421g00014 256 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 50 252 IPR027417 -
Stsc181421g00014 256 Gene3D - 1 52 IPR035897 -
Stsc181421g00014 256 Coils Coil 1 21 - -
Stsc181421g00014 256 PRINTS Disease resistance protein signature 91 106 - -
Stsc181421g00014 256 PRINTS Disease resistance protein signature 167 181 - -
Stsc181421g00014 256 Gene3D - 53 218 IPR027417 -
Stsc181421g00014 256 Pfam NB-ARC domain 72 245 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181421g00014 Stsc-Chr181421 57380 62089 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181421g00014 89 245 WRKY Transcription Factor Family AT5G45050 40.127 3.44e-26 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181421g00014 - - ahf:112751484 398.667