Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181420g00010 ATGCCAACAAAAATCATGGGAGATGAAGAAGGTGCAGTTGGAGTGAGAGGTGTGAATGAAGAAAGTGATTATGGTTTTGGAGAGAATAACAATAATAATAACAAGAGTAATGAAGATGATAAGAAGTGGCCACCATGGCTGAAACCACTTCTGAAAACAAGCTTCTTTGTTCAATGCAAAGTCCATGGTGATTCCCACAAAAGTGAATGCAACATGTATTGCTTGGATTGTATGAATGGAGCTCTTTGTTCTGCTTGTTTGGCTTCTCACAGAGACCACAGAGCCATTCAGATAAGGAGGTCTTCATACCATGATGTGATAAGGGTGTCTGAGATTCAGAAATTCATGGACATAGCAGGAGTTCAGACATACATAATAAACAGTGCAAAGATTGTGTTCCTCAATGAGAGGCCTCAGCCAAGGCCTGGCAAAGGTGTCACCAACACTTGCCATGTCTGTGATCGCAGCCTCCTTGATTCCTTCACCTTCTGCTCTCTTGGTTGTAAGATAGCTGGAACTTCTTCTTCCAACAAGTTCATCAGGAAGAAGAAGAAGTTAGAAGATGGTGGTGATTCTGATGGAGAAGAGTCAATGAATAATGGGAGTGGCAGAAACAGAATAATCCAGAGCTTCACACCATCAACACCACCACCTTACAGGACTGCTAAGAGGAGGAAGGGTGTCCCCCATAGAGCTCCAATGGGGGGAGGACTAATCATAGAATACTAA 729 0.4294 MPTKIMGDEEGAVGVRGVNEESDYGFGENNNNNNKSNEDDKKWPPWLKPLLKTSFFVQCKVHGDSHKSECNMYCLDCMNGALCSACLASHRDHRAIQIRRSSYHDVIRVSEIQKFMDIAGVQTYIINSAKIVFLNERPQPRPGKGVTNTCHVCDRSLLDSFTFCSLGCKIAGTSSSNKFIRKKKKLEDGGDSDGEESMNNGSGRNRIIQSFTPSTPPPYRTAKRRKGVPHRAPMGGGLIIEY 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181420g00010 242 CDD Bbox2 59 98 - -
Stsc181420g00010 242 MobiDBLite consensus disorder prediction 18 43 - -
Stsc181420g00010 242 Pfam PLATZ transcription factor 99 170 IPR006734 -
Stsc181420g00010 242 MobiDBLite consensus disorder prediction 195 217 - -
Stsc181420g00010 242 MobiDBLite consensus disorder prediction 183 242 - -
Stsc181420g00010 242 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 37 234 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181420g00010 Stsc-Chr181420 66497 68549 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Stsc181420g00010 PLATZ 5.4e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181420g00010 - - gmx:100792668 362.459