Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181420g00007 ATGCATTTGAAAAGTAGTGTGCTTGTTGATAATGGTGAGTTAATTGAGTGTGTTGTTGGTTTAGGGTTTGATTTGATCCAGTGGAAGGGGTTTGGGACACTAGCATCTCAACTGAGTTATGGTAACATTGAGGGGAATGTTCTGAGATATCGAGGTATCACCCAAGTCAGAAAGAAATTTGCCAACCACTCTACGATTCAGACTGCTGATATGAGACTTGAATCAGGGACTTGTAATGTGTGTTCAGCTCCTTGTTCATCTTGCACATATCCTAACCATTCTCTCATGGGGTTAAAGGCCGAAGAATCTTCCGATGAAAACTGTCGTTTAGGGGAGGCCAATAATCATTATTCTATGGATCGGGGCAATTTATCTTCTCCTAGGAGTAAAGCTTCTGAAAGCTTGCAGCATGCTGTCAGTGAAACCAGTAACATTCTCAGTGTTAATTCTAGTCAAGATTCTATATCTGAAAATGCCCAGAGTAGACAGGTCTTGTCAGATAAGTATCAGGACTCAAAATATTTAGAAGGCCATGATGATAACATTTCTAGTATTAGTAGAGCCAGTGATTCTAATTTAGAGAACACTAGCCATCAAAGAAATGCAGAAAGAATAAATGCTTGTAGTTCAGCTTCAGTTAGTCATGTAGGTGTAGAAGGATCCGGCTTGTCTGAGATTCCATCATCTAAAGATGTAGATACTGGGCATAGCTCATCTAAGGTACAAAGCATGAATGGACAATCTCAAAGTGGTAAATCTCTCTCAGATAGTGCAAGCTTAAGTCGTCAAGAAGGGGATTTATCATCTCGTATCCCTGAAAAGTTGTTAGAATGCCCTAATGAAAACCCTGATTCATCACTGAACAAAGAGACAGCGTCTACCCTTGTATCTGGTGAGAAATCTGTTGCCAGTAATGCCAAGGTTTCATCGGAAGTTTGTCCAAAGTCAGAAGCAGATACTGATAATGTTGGTGATGCTAAAGATGAAAGCTGTAAAGGTTCAGTCCGTGATGGACAGCATGAGAAGACTGAGGAGCTGGTTAAATCCCCTTTTAAGCAAGAACTTCAATCTGAGGATGAGAGTGATGAATTGGATGCTGTGGAACATGATGTAAAGGTGTGTGACATATGTGGAGATGCTGGTCGAGAGGATCTACTAGCTATATGTAGTAGGTGCAGTGATGGTGCTGAGCACACCTACTGCATGCGAGAAATGCTTCAGAAGGTCCCTGAAGGGGAGTGGTTATGTGAAGAATGTAAATGTATAGAGGAGACTGAAAATCAAAGGCTTGAAGCTGAGGAGAAAATAATTCATAAAGGTAGTTTAGCTTCACAAGTTTCTAACAAACGACTTTCGGAAAACATTGAAGTAGCTCCTGCAGCAAAAAGGCAAGCTCTTGAATCAAGCACAGGGTCACCAAAGGCATCGAGTCCCAAAAGATTAGTTCCACTGTCTCGTGAATCTTCCTTTAAGAACTTAGATAAAGGTAAAGTGAAGCCTGGTCATCTGATGCCTATTCGTAATCATTCTGGTGGCGATGACACAGAAGTTGCTCGTTCTCCTTCCATTGGTCCCCGAAGTCAAATTCCCAAGAGTACATTGTCGAAATGTAGCTCTTTCAACAACTTGAATTCCAAGCCTAGAGTCAAAATTGTTGATGATGTTCCCCAGAAACCGAAATGGGCTGCTGAACAGTCCTCCAAGAATATGGAGATGCCTGCCCGGATGACAGGCAAATCAACATTATTCAAATCCTCAAGTATGGGTAGGTCAAGTGCAACTGCACCGAAAGTTAAAATGCTTTCACCGAAGTGTGCAACTGCTCAGGAGTCAAAAGGACCAAAACATTTGAAAGAATCAGGTGCATTTGACAGGAAATTTCCATCTAGGACTGATCGGCCTGTTGTTAGTTCATCAATAGCTGGTTCTGTTGTGTCTACAGCTAAGGGTGATCAGAAGCTAACATCTCGTGGTGAAACCACTAAACCTTCAGCAGTATCCAACAACCGAGAATTGAAGGTTAACCAGGATGGAAAATCGAATACATCATATAAGTCAATGAGTAACGTAAGTCAGAAAACTTTGGAGCCTCAAGTTTGCTCAGAGAGAACATCAACCAATATTGACGAAGCTGTACAGGATGTCCTGCCTCGATCACGAGAGACAGCAAATCAGGTTGAGAAAACCAGAGGTAGTTCTAATGATCGTGCGAGGCCAGGTTTTGCTAATGCTTCAAAAAATCCATTCTGTCAAAAATGTAAAGAATATGGCCATGTTCTGGAATTTTGTACCGCTGGTAATGCACAGGAATCTGGAGCTGAAGTATCATTCTCTGCCTCAAGTAGTTCAACTGAGGATATGCATAAGGGTAATAAATTGAAAGCTGCAATCCAGGCTGCTCTACTTAGAAGGCCTGAAATATACAAGAAAAAAGAAGTACCTAATCAAACTGATGGGGTTTCTGCATCAAGCACAAAGTTGAATTGTGAAGTCATTTCGCAAGACCAACCAATTGTTTCCGGCTCACCAAAGAATAGAATATTAGCTGAAGAAATCCGGGAACAGCAAGAAATCCTTGAGAATTTGACATCCGATTCGATCAAATGTTTGTCTGATGATGATTTGAAGCAAGCTAAAAGTTCTCCAACTGATTTTTGTCCTCAAGCAGTAAAGTTAGATTCCGTTGGCCTTGCTGCTGGAAAGCCTGTAGTAAGAGATTTGTCTAAAAAAGCTTTGGCCATCCCAATTGCTATTTCGAAGATGTTGGTCATTCCAGAATATGAATATATCTGGCAGTATGGAATATTCTTTTATGGAGTAGTTGTCTTCAATTCTGGAATTTTCTTGCTGCATTACATTTTGTTTTTTGCAATGAAATGTTCTACAGGATCTTTGTTGTTTGCATGTAGGGGTGTCTTTGAAGTGCATCGAAATGGAAAGCCTCCTAACTTTTGTGCTGGAGTTCAGGCACATTTATCCTCTCGTGCTTCCCCAAAGGTCCGTGAGGAAGTGAACAAGTTTCTACCCAAAGTTACCCTGAATGAAGTTTCTCGTTTGAGCACATGGCCTTCACAATTTCATCAGGTTGGCCCAAGAGAGGATCATATTGCTCTTTACTTCTTTGCCAAAGATATTGAGAGTTATGAGAAGCACTACAAGGGTCTAGTGGATCACATGATTAGAAGTGATTTAGCACTTAAAGGAACTTTTGATGGCTGGAATATGTTGTTTTTCTTATGGGGTGTATTTAGGGTGAGGAGGATCAGTCATTTGGATTCAACAGAAAAAAATTGTATTCCCAGTTTGAATGCAGTGCCTGTTGAAGAGGATTCTACAACTGCTGTTGTGACCAAGTCTGAAACGCATTGCTCTGATGAAGTATGCGCTGCATGTCTTCCTTCCACCTATATAGACCAACCTCAGATTACACCAAGTGTGAACAATGATATCAATGACCAGACACATTTGGGTTCACAAGTAAAGTTGGAGAAGCAAGATAGTGGACTTGACATCAAATCTACATCAATGGTTCCTGTTGACAGTGCACTGTTATGCCATGAAATGAAATCCACTGGTTCATCGCTGAAACCTAGTGTACTAGAACATGGACAGTGTAGAGAGTCTAAGCCTCCTGAAGCCGTGGGGACTAGTGTAAATACAAGGACTGTTGAAACAAAAACTGGTTTTGACATTTCTGTAAAGCAAGAGAAAGCCTTGTTGACAGAGATTCCCTCTGTTTGCAAGCAAGAAAGTGTTATTAATCATAAAATGTCAGAGAGAGTGAAACGTGATGAAGATCAGCAAAATCCCAATATGAAACAGAAAGCAGATGATCACTATATTGACTTGGAAGCAACTGCTTGTGATCAAGGAAAAGATGCTGAAAGCCATTCTATTAGACATAAAATTTCAGCGATGATAAACAGTGATGAAGAAGGTCAGCAAAGGCCTAAGAGAAAACCTAAAGGTGTTTACTTTATTGACTTGGAGGCAACTGTTGGAGATCAAGAAACAGATACTATAAGCAATGATAGTAAGGATAGAATTTCTGAGAGAACAAATGGTGAAGAAGATCAGCGAAGGCCCAAGAGGAAGCAGAAAGATTATCATTACATTGACTTGGAGGCACCTGTAGACAATCATGACCCAGATTCTGCAAACAGTATTTGTAAGGATAAAAGCTTGGGGAGAATGGATGGTGAAGATAAGCAATGGCCAAAGAAACAAAAAGATTATCATTATATTGACTTGGAGGCAAACGATGAAGAAGGAGTTCAATATGTAGATCTTTCTGACCCAGTTATGCAGGCTCCTGCTGTCAGTGGTCAGAAACGGTATTGGAATGAGGTAAATGGAAAATTGGAAGACGGAGGAAGCTCTAGCAAGAAGCTGAAGGCAGGTTTTGGTGGGATTTTTGGAGGTTCCAGTTCCGAAAGTAGGGACTCTCTCGAAATCGGTTCATCTTCAGTTGAGGGAAAAGGGTGTAAAGGAGCTTGTGAGGAGAAAATCATCCCTGGGGATGTTGGATCAATTGAAAGAACCTTCTTTCCAGTTGGTAACTCGCAGTTGGGGCTAAGCAGCACGTCACTAAAAGGGCCTCATGAGTGCAGGGACCAATTTCATGATGCAATTCCAAATCTAGAGCTTGCTTTAAGGGGCGAAACAATACCACCTCCACCTCCTCCTCCACCTGCGCAGCGAATGCTTCCTTTCCTTGTTGGAGCAGTAGACAGGAAAAATAGCCCAAACAATCCGGAAGATGATGATGGTGATGCTGCATCTCTTTCACTTTCTCTATCCTTTCCAACTTCCAACAAGGACCCAAAACTACATGCTTCAAAAGCAGCAGAGGTCTTACCACCTGATGAGCACCGTGTGAATAGTTCGTTCCTCCTTTTTGGGAGATACACAGACAAATAA 4920 0.4132 MHLKSSVLVDNGELIECVVGLGFDLIQWKGFGTLASQLSYGNIEGNVLRYRGITQVRKKFANHSTIQTADMRLESGTCNVCSAPCSSCTYPNHSLMGLKAEESSDENCRLGEANNHYSMDRGNLSSPRSKASESLQHAVSETSNILSVNSSQDSISENAQSRQVLSDKYQDSKYLEGHDDNISSISRASDSNLENTSHQRNAERINACSSASVSHVGVEGSGLSEIPSSKDVDTGHSSSKVQSMNGQSQSGKSLSDSASLSRQEGDLSSRIPEKLLECPNENPDSSLNKETASTLVSGEKSVASNAKVSSEVCPKSEADTDNVGDAKDESCKGSVRDGQHEKTEELVKSPFKQELQSEDESDELDAVEHDVKVCDICGDAGREDLLAICSRCSDGAEHTYCMREMLQKVPEGEWLCEECKCIEETENQRLEAEEKIIHKGSLASQVSNKRLSENIEVAPAAKRQALESSTGSPKASSPKRLVPLSRESSFKNLDKGKVKPGHLMPIRNHSGGDDTEVARSPSIGPRSQIPKSTLSKCSSFNNLNSKPRVKIVDDVPQKPKWAAEQSSKNMEMPARMTGKSTLFKSSSMGRSSATAPKVKMLSPKCATAQESKGPKHLKESGAFDRKFPSRTDRPVVSSSIAGSVVSTAKGDQKLTSRGETTKPSAVSNNRELKVNQDGKSNTSYKSMSNVSQKTLEPQVCSERTSTNIDEAVQDVLPRSRETANQVEKTRGSSNDRARPGFANASKNPFCQKCKEYGHVLEFCTAGNAQESGAEVSFSASSSSTEDMHKGNKLKAAIQAALLRRPEIYKKKEVPNQTDGVSASSTKLNCEVISQDQPIVSGSPKNRILAEEIREQQEILENLTSDSIKCLSDDDLKQAKSSPTDFCPQAVKLDSVGLAAGKPVVRDLSKKALAIPIAISKMLVIPEYEYIWQYGIFFYGVVVFNSGIFLLHYILFFAMKCSTGSLLFACRGVFEVHRNGKPPNFCAGVQAHLSSRASPKVREEVNKFLPKVTLNEVSRLSTWPSQFHQVGPREDHIALYFFAKDIESYEKHYKGLVDHMIRSDLALKGTFDGWNMLFFLWGVFRVRRISHLDSTEKNCIPSLNAVPVEEDSTTAVVTKSETHCSDEVCAACLPSTYIDQPQITPSVNNDINDQTHLGSQVKLEKQDSGLDIKSTSMVPVDSALLCHEMKSTGSSLKPSVLEHGQCRESKPPEAVGTSVNTRTVETKTGFDISVKQEKALLTEIPSVCKQESVINHKMSERVKRDEDQQNPNMKQKADDHYIDLEATACDQGKDAESHSIRHKISAMINSDEEGQQRPKRKPKGVYFIDLEATVGDQETDTISNDSKDRISERTNGEEDQRRPKRKQKDYHYIDLEAPVDNHDPDSANSICKDKSLGRMDGEDKQWPKKQKDYHYIDLEANDEEGVQYVDLSDPVMQAPAVSGQKRYWNEVNGKLEDGGSSSKKLKAGFGGIFGGSSSESRDSLEIGSSSVEGKGCKGACEEKIIPGDVGSIERTFFPVGNSQLGLSSTSLKGPHECRDQFHDAIPNLELALRGETIPPPPPPPPAQRMLPFLVGAVDRKNSPNNPEDDDGDAASLSLSLSFPTSNKDPKLHASKAAEVLPPDEHRVNSSFLLFGRYTDK 1639
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181420g00007 1639 MobiDBLite consensus disorder prediction 521 543 - -
Stsc181420g00007 1639 MobiDBLite consensus disorder prediction 227 266 - -
Stsc181420g00007 1639 Coils Coil 845 865 - -
Stsc181420g00007 1639 SMART PHD_3 373 420 IPR001965 -
Stsc181420g00007 1639 MobiDBLite consensus disorder prediction 149 364 - -
Stsc181420g00007 1639 MobiDBLite consensus disorder prediction 1336 1404 - -
Stsc181420g00007 1639 MobiDBLite consensus disorder prediction 118 134 - -
Stsc181420g00007 1639 MobiDBLite consensus disorder prediction 149 168 - -
Stsc181420g00007 1639 PANTHER - 371 1103 - -
Stsc181420g00007 1639 MobiDBLite consensus disorder prediction 632 740 - -
Stsc181420g00007 1639 SUPERFAMILY FYVE/PHD zinc finger 361 423 IPR011011 -
Stsc181420g00007 1639 MobiDBLite consensus disorder prediction 1340 1404 - -
Stsc181420g00007 1639 MobiDBLite consensus disorder prediction 1576 1610 - -
Stsc181420g00007 1639 MobiDBLite consensus disorder prediction 182 217 - -
Stsc181420g00007 1639 MobiDBLite consensus disorder prediction 318 357 - -
Stsc181420g00007 1639 MobiDBLite consensus disorder prediction 462 543 - -
Stsc181420g00007 1639 MobiDBLite consensus disorder prediction 582 744 - -
Stsc181420g00007 1639 MobiDBLite consensus disorder prediction 111 134 - -
Stsc181420g00007 1639 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 357 444 IPR013083 -
Stsc181420g00007 1639 MobiDBLite consensus disorder prediction 281 311 - -
Stsc181420g00007 1639 MobiDBLite consensus disorder prediction 611 631 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181420g00007 Stsc-Chr181420 48264 56428 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181420g00007 370 432 C2H2 Transcription Factor Family AT3G01460 33.333 5.91e-06 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181420g00007 - - adu:107488482 2527.28