Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181417g00002 ATGCATGTTCTTATTAATTACAACAACCCAGAAGCCAATAACCTCACTAATCAGAAACTGCCACCTGGCCCAACAAAGCTACCAATCATTGGCAACCTTCTCCAGCTTGCAGCAGCAGGTTCACTTCCGCACCGTTCTCTCAGAGAATTAGCCAAAAAATATGGACCCATCATGCACCTCAAGCTCGGTGAAAACCCTGCCGTAGTGATATCCTCACCGGAGCTTGCCATGGAGATACTCAAAACCCATGACGTGTGTTTTCTGAAACGCCCACATCTTCTTGTTGCTGAGAGTTTAACCTTCGGTTCTTCAGACATTGTTTTTGCTCCGTGCGGTGATCTGTGGAGGCAACTGAGAAAGATATGCACGACGGAGCTTCTAAGTGTTAAGAGGGTTCGCTCTTTCTCTCGTATCAGAGAAGAAGAGTCCGCCAAATTCATCGAATCGATTATTCGGGAGTCCTCATCAGGTTCTTCAGCAGTGAATCTGAAAAGCATGATTTTCTCGTTGATAAGCGCTTCTGTTTACAGGTCTGCATTTGGAAAGATGGGCGAAGACATGAATGAAATTGAAGAGTTTGTAAGTCTGACAAGGAAGGCAATTGAAATGGCGAGTGGGTTTTATTTGGCTGATTTGTTTCCTTCTGTGAAACCTCTGTATTACGTGACTGGGATGAAGTCTAAGATGAGGAACATACGGAACAAGCTTGAGAAGATTTTGGAGAACATAATAAGGGAGCATCAGCACAAGCAAGAAGATGCAAATGAGGAAGAAGATCTTGTTGATGTTCTTCTCAGATTCCATCAGAATAGCAATACTAATCACCAGTTTCATGTAGCAACTGGAACCATCAAAGCTGTCATCATGGACATATTTGCTGCTGGAATTGATACTTCAGCATCGACATTAGAGTGGGCTATGTCTGAATTGATTAGGAATCCAAAAGTGATGGCGAAGTCACAAGCGGAAATAAGAGAAGCTTTTAGAGGAAAGCAAAGAATCAATGAAAGTGATGTGGATCGACTAAGTTACTTGAAGTTGGTGATAAAAGAAACGCTGAGGTTACATGCACCTACACCTTTGTTGATCCCTAGAGAATGCTCTGAGAGATGCATGATCGGTGGGTATGAAATAGGTGTGGGGACAAGAGTCATGGTGAACGTGTGGGCCATTGGAAGAGACCCTCAGTATTGGCATGATGCTGAGAGGTTTATGCCAGAGAGGTTTGGTGGCAATTGTCCCATTGATTTCAGAGGGAATAGCTTTGAGTATTTACCATTTGGTGGAGGAAGGAGAATCTGCCCTGGCATATCATATGGTTTAGCCAGCATTATGTTCCCTTTGGCTCTCTTACTCTATCATTTCAACTGGGAACTCCCTCACCCCATGAAACCTGAGGATTTGGACATGACTGAACACCCTGGTTTGGCAATAGAAAGGAAAAATGACTTGTGCTTGATTCCCACTCTTCTTTTGTAA 1479 0.4348 MHVLINYNNPEANNLTNQKLPPGPTKLPIIGNLLQLAAAGSLPHRSLRELAKKYGPIMHLKLGENPAVVISSPELAMEILKTHDVCFLKRPHLLVAESLTFGSSDIVFAPCGDLWRQLRKICTTELLSVKRVRSFSRIREEESAKFIESIIRESSSGSSAVNLKSMIFSLISASVYRSAFGKMGEDMNEIEEFVSLTRKAIEMASGFYLADLFPSVKPLYYVTGMKSKMRNIRNKLEKILENIIREHQHKQEDANEEEDLVDVLLRFHQNSNTNHQFHVATGTIKAVIMDIFAAGIDTSASTLEWAMSELIRNPKVMAKSQAEIREAFRGKQRINESDVDRLSYLKLVIKETLRLHAPTPLLIPRECSERCMIGGYEIGVGTRVMVNVWAIGRDPQYWHDAERFMPERFGGNCPIDFRGNSFEYLPFGGGRRICPGISYGLASIMFPLALLLYHFNWELPHPMKPEDLDMTEHPGLAIERKNDLCLIPTLLL 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181417g00002 492 PRINTS E-class P450 group I signature 283 300 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181417g00002 492 PRINTS E-class P450 group I signature 424 434 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181417g00002 492 PRINTS E-class P450 group I signature 387 411 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181417g00002 492 PRINTS E-class P450 group I signature 51 70 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181417g00002 492 PRINTS E-class P450 group I signature 303 329 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181417g00002 492 PRINTS E-class P450 group I signature 346 364 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181417g00002 492 PRINTS E-class P450 group I signature 434 457 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181417g00002 492 PRINTS E-class P450 group I signature 75 96 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181417g00002 492 PANTHER OS08G0105600 PROTEIN 46 489 - -
Stsc181417g00002 492 Pfam Cytochrome P450 21 481 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181417g00002 492 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 427 436 IPR017972 GO:0005506|GO:0016705
Stsc181417g00002 492 FunFam Cytochrome P450 99A2 11 489 - -
Stsc181417g00002 492 SUPERFAMILY Cytochrome P450 21 488 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181417g00002 492 PRINTS P450 superfamily signature 347 358 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181417g00002 492 PRINTS P450 superfamily signature 294 311 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181417g00002 492 PRINTS P450 superfamily signature 425 434 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181417g00002 492 Coils Coil 222 260 - -
Stsc181417g00002 492 CDD CYP71-like 53 484 - -
Stsc181417g00002 492 Gene3D Cytochrome P450 14 484 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181417g00002 Stsc-Chr181417 4271 6077 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181417g00002 13 492 Cytochrome P450 AT3G26300 45.549 8.72e-142 415
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181417g00002 - K15472 gmx:100785175 578.941