Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181417g00001 ATGATCATGCATCTTCTTAATTACAACCCAAAACCTCAGAAACTGCCACCTGGCCCAAGAAAGTTACCAATCATTGGCAACCTTCACCACCTCACAGCATCAGGTTCACTCCCACACCGTTCTCTCACAGAATTAGCCAAGAAATACGGACCCATCATGCACCTCAAGCTCGGTGAGAACCCTTCCGTGGTTATATCCTCCCCGGAGCTTGCCATGGAGATAATCAAAACCCATGACGTGTGTTTTCAGACGCGCCCACATCCTCTTGTTTCCGAGAGCTTAACCTTCGGTTCTTCAGATATTGCTTTTGCTCCGTGCGGTGATATGTGGAGACAACTGAGAAAGATATGTACAACGGAGCTTCTAAGTGTTAAGAGGGTTCACTCTTTCTCTCATATCAGAGATGAAGAGTCAGCAAAATTAATTGAATCGATTCGGGAGTCATCCTCTTCAGGTTCAGAAGTGAATCTGAAAAGCATGATTTTCTCGTTGATAACTGTATCTGTTTACAGATCTGCGTTTGGAAAGATACCAGAAGACAAGAATGAAATTGAAGAGTTTATAAGTCTGACAAGGAAAGTGACAGAAATGGCGAGTGGGTTTTATTTGGCTGACTTGTTTCCTTCTGTGAAGCCTCTGTATTACTTGACTGGGATGAAGTCCAAAGTGGGGAAGCTAAGGAACAAGCTTGAGAAGATCTTTGATAACATAATAATGGAGCATCAGCACAAGAAGCATGATGCAAAGGAGGAAGAAGATCTTGTTGATGTTCTTCTCAGATTCCACCAGAATAGCACAACTAATCACCAGTTTCCCGTAACAACCGGAACAATCAAAGCTGTCATCATGGACATATTTGCTGCGGGAATTGATACTTCAGCATCTACAATAGAGTGGGCTCTGTCTGAAATGGTTAGGAATCCAAAAGTGTTGGCAAAGGCACAAGCCGAGATTAGAGAAGCTTTTAAAGGAAAGCAAAGAATCCATGAAAGTGATGTGGATCAACTAAGTTACTTAAAGTTGGTGATCAAAGAAACACTGAGGTTACATGTACCTCTGCCTTTGATCCCTAGAGAATGCACAGAGAGATGCATGATTGGTGGCTATGAAATAGGTGTGGGCACAAGAGTGATGGTGAACGCGTGGGCCATGGCAAGAGACCCAGAGTATTGGCATGATGCTGAGAGGTTTATGCCAGAGAGGTTTGATGGAAATTGTCCCATTGATTTCAGAGGGAATAGCTTTGAGTATTTACCATTTGGTGGAGGAAGGAGAATATGCCCTGGCATAACATTTAGTTTAGCCAGCATTATGTTCCCTTTGGCTCTGTTACTCTATCACTTCAACTGGGAACTCCCTAACGCCATGAAACCTGAGGATTTGGACATGACTGAACACTTTGGATTGGCAATAGAAAGGAAAAAGGACTTGTGCTTGATTCCCACTCTTGTTTTGTAA 1458 0.43 MIMHLLNYNPKPQKLPPGPRKLPIIGNLHHLTASGSLPHRSLTELAKKYGPIMHLKLGENPSVVISSPELAMEIIKTHDVCFQTRPHPLVSESLTFGSSDIAFAPCGDMWRQLRKICTTELLSVKRVHSFSHIRDEESAKLIESIRESSSSGSEVNLKSMIFSLITVSVYRSAFGKIPEDKNEIEEFISLTRKVTEMASGFYLADLFPSVKPLYYLTGMKSKVGKLRNKLEKIFDNIIMEHQHKKHDAKEEEDLVDVLLRFHQNSTTNHQFPVTTGTIKAVIMDIFAAGIDTSASTIEWALSEMVRNPKVLAKAQAEIREAFKGKQRIHESDVDQLSYLKLVIKETLRLHVPLPLIPRECTERCMIGGYEIGVGTRVMVNAWAMARDPEYWHDAERFMPERFDGNCPIDFRGNSFEYLPFGGGRRICPGITFSLASIMFPLALLLYHFNWELPNAMKPEDLDMTEHFGLAIERKKDLCLIPTLVL 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181417g00001 485 PRINTS E-class P450 group I signature 46 65 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181417g00001 485 PRINTS E-class P450 group I signature 380 404 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181417g00001 485 PRINTS E-class P450 group I signature 417 427 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181417g00001 485 PRINTS E-class P450 group I signature 340 358 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181417g00001 485 PRINTS E-class P450 group I signature 297 323 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181417g00001 485 PRINTS E-class P450 group I signature 427 450 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181417g00001 485 PRINTS E-class P450 group I signature 277 294 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181417g00001 485 Pfam Cytochrome P450 16 471 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181417g00001 485 FunFam Cytochrome P450 99A2 6 482 - -
Stsc181417g00001 485 PRINTS P450 superfamily signature 418 427 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181417g00001 485 PRINTS P450 superfamily signature 288 305 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181417g00001 485 PRINTS P450 superfamily signature 341 352 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181417g00001 485 Gene3D Cytochrome P450 3 479 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181417g00001 485 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 420 429 IPR017972 GO:0005506|GO:0016705
Stsc181417g00001 485 PANTHER OS08G0105600 PROTEIN 42 482 - -
Stsc181417g00001 485 CDD CYP71-like 48 477 - -
Stsc181417g00001 485 SUPERFAMILY Cytochrome P450 16 481 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181417g00001 Stsc-Chr181417 1360 3417 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181417g00001 13 485 Cytochrome P450 AT3G26300 44.118 2.56e-135 398