Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181416g00001 ATGGCAAGGGCAAGGGATAGAACCGAGGATTTCAAAGATGCTGTGCGACACAGTGCTCGATCTTTGGGGTATGATGAGGCAAAGTTGGCATCAGTTATGGCATCTTTCATTATTCATAAACCTCCTCAAAGGTCGCCATTTTCAAAAGCTGCACTGAAGACGCTCGAGAGTATTGGAGAACTAGAACAATTTTTGTCAAAGCATAGAAAGGACTATATGGATCTCCACCGCACAACTGAAAAAGAGAGAGATAGCATTGAGCATGAAGTTAGTGCTTTCATTAAAACTTGTCAGGAACAAATCGATGTTCTAAAAAATAGTATAAATCAAGAAGAGGAAACTTCAAAAGGATGGCTTGGAATTGCAACTTCAAAGGCTAATGCTGACACCATTGCCCACAAACATGGGGTGGTTCTAATCTTAAGTGAGAAACTCCATTCAGTATCATCTCAGTTTGATAAGCTTCGAGCTGTTCGTTTCCAAGATGCCATTAATCGAGCAATGCCACGAAAAAAGCTTAATCGCATAACCAAGAAAGGTTCTATTGAAACCCCTAAATCAGATGATTTGGAGCTCAGAGAACCCAGTGAATTACACAGTGAGCCTCTAAGAGTCCAACAACAGCTATTGGATGATGAAACACGTGCACTTCAGGTGGAATTGTCTAATATGCTAGATACAGTTCAAGAAACCGAAACTAAGATGGTGGAAATGTCTGCATTAAATCACCTCGTATCTACACACGTCTTGCAACAAGCTCAGCAAATTGAGCATCTGTATGAGCAGGCTGTTGAAGCTACTAAGAATGTTGAGCTTGGCAACAAAGAACTTTCCCAAGCCATTCAGCGGAATAGCAGCAGCAGAACTTTTCTTATACTTTTTCTATTTGTGCTTACATTTTCAGTTCTCTTTCTTGATTGGTACAGTTAA 930 0.4032 MARARDRTEDFKDAVRHSARSLGYDEAKLASVMASFIIHKPPQRSPFSKAALKTLESIGELEQFLSKHRKDYMDLHRTTEKERDSIEHEVSAFIKTCQEQIDVLKNSINQEEETSKGWLGIATSKANADTIAHKHGVVLILSEKLHSVSSQFDKLRAVRFQDAINRAMPRKKLNRITKKGSIETPKSDDLELREPSELHSEPLRVQQQLLDDETRALQVELSNMLDTVQETETKMVEMSALNHLVSTHVLQQAQQIEHLYEQAVEATKNVELGNKELSQAIQRNSSSRTFLILFLFVLTFSVLFLDWYS 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181416g00001 309 PANTHER SYNTAXIN-18 1 309 - -
Stsc181416g00001 309 MobiDBLite consensus disorder prediction 176 195 - -
Stsc181416g00001 309 SUPERFAMILY t-snare proteins 54 273 IPR010989 GO:0016020|GO:0016192
Stsc181416g00001 309 MobiDBLite consensus disorder prediction 174 195 - -
Stsc181416g00001 309 FunFam Syntaxin-81 like 212 306 - -
Stsc181416g00001 309 Coils Coil 94 114 - -
Stsc181416g00001 309 Gene3D - 211 306 - -
Stsc181416g00001 309 Pfam SNARE-complex protein Syntaxin-18 N-terminus 6 86 IPR019529 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181416g00001 Stsc-Chr181416 2923 6357 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181416g00001 67 309 SNARE and Associated Proteins AT1G51740 72.951 1.97e-111 321
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181416g00001 K08492 - gmx:100778011 531.946