Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181413g00006 ATGGCGCCGGCGGCACCCACAAAACGAGACGAGCAAGAAGCTCTACGCCTCAAGTCCCTCGCCGACTCCAACTTCACTTCCTCCAAAGACCTCAATTCCGCCTTCAACTACGCCAACCGCGCCCACCGCCTCGCGCCGAACCTCCCCGGCGTCGCCGAGATTCTCGCAGCCCTCACCGTCCTCCGCGCCGCCGCTGCTAGCAACTCCTCCTGCCCCGACTGGTACGCCATCCTCGGTGCTGAGCCCTTCGCCCCCGCCTCCGTCCTCCGCAAGCGCTACAAGCAGCTGGCACTCCTACTCCACCCGGACAAGAGCCCCCACGTGGCATCTGATGAGGCATTCAAGCTTGTTGCCGAGGCCTTCCGGTTGCTATCCGACAGGGCATGGAAGAGGGATTACGATGCCAAGCTCAGGTTGCGGATTCTGGATGAGAAGGAGAATGAGAAGGCTGGTGAAGAGGACATGGATACGTTTTGGACTGAATGCTCCACTTGCAGGCTCTTGCACCAGTTTGAGAGGAAGTATGTTGGCCATAATCTGGTATGCCCTACTTGTAGGAAGAGTTTTAAGGCTGTAGAGGTAGGTAGCGATGATGATGGGTCTCAAGAGGAGGAAAGCGAGGAGGAGGAGGAGGAGGAGGAGGTAGAAGAAGAAGAGGTAGAGAGGGCTAAGAAGGGTACGAGTGGGAAGTTGAAATCAAAAGAGGTGGTGGATGATGGTGAGAGATTGGGGGATTTTTTGTTGAGGAGAAAATCCAAGAATGTGAAAGGGAAAATGGGTGGTGAAAATGGGGTAGGCCTGACGAGGAGCCAGGGTTTGAAGGGTGGAGTTGAGGGTGATGAAGTGAGAAATGAAGATTCTGAGAGTAGAGGAGAGGGTGTTGAGGGAAGGTTGAAAAATGGGGATTTGAAGAAAAGGACTAAGGAGAAAGTGGGTATTGAAAAAGCTGGAGGCTTGGCAAGAAGCAGGCCTTTGAAGGGTGGAGTTGAGAGTAATGAAGTGGGAAATGCAGCCTTGGAGAGTGAAAGAGAGGGAGTTGGGGGAAGGTTGAGAAGTGGGGATTTGAGGAAGAGGAGGCATATGGTTGGGGAGGTGTTGGACACTTCAAAACCCAAGAGGGTCAAAACTGGGGAGGAAATGATGACATTGGCTGAGTTTCAGTCTGAAGTGAAGCGTACCGCACAGCAGAAGAAGATGAAGTTGAAAATAAAGGAAAATGGAGAAGATCATCGAACAGAGAGGAGGAGCAAGCAGGGGGAGAAACCAGGTGAGTTGAAAAATAACAAGGATTTAGAGGCTGGGGAAGATAGGAGTATGAAGAAGAGTGCAATGCTATTAGTCAAGGGGAAGAAAGAGGACTCTGTGAAGAAGAAGGAAGCGAGACCTGAGAAGCACAGGGATTCTGGTGGAAGGGACTTGGAGACCATGACAGTGGTGGATTCGGATTTTTATGATTTTGACAAAGACAGAACTCAGAGATGCTTTAGGAAAGGCCAAATGTGGGCTGTATATGATGATATTGATGGAATGCCTAGGCATTATGCCTTGATTGATGAAGTTTTTTCAGCAAATCCTTTTCAAGTGGGTATAAGTTGGTTTGATATACAAAACAACGGGGTTGAAAAGATTATTAGTTGTGAAAAAATGGGGTTTCACATGCCTTGTGGAAGATTTACAGTTGCCCAGAAGGCTTCCATAAATTCGGTAAACATATTTTCTCATATTGTGGACTGTGATCGGGTAGCACGTGAGGTTTACCAAGTTTATCCAAAGAAGGGTTCAGTATGGGCACTTTATGGTAAGGCAACTCTTGATAAAGATGGAAAAAATTTTGCAGCCAAGAGCAAGAGATGCTATGACATTGTTGTATTCTTAACAAGTTACAGTGAAATCACTGGTCTGAGCATGGCATATCTAGAGAAGGTTGATGGTTATCAGACTGTATTTAAGAGACAGGACATGGGGAGTCACGCTATTAGATTTCTTGGAAAGGATGACCTGTGGTTAGTTTCTCATCAGATTCCTGCAAGGAAACTATCTTGTGAGGATACTCCTGAGCTTTTGAAAGATTGTTGGGAACTTGATCCTGCTTCACTTTCCTCAGATTTACTTACTGTTTGTGGCATAGATAATTGA 2136 0.478 MAPAAPTKRDEQEALRLKSLADSNFTSSKDLNSAFNYANRAHRLAPNLPGVAEILAALTVLRAAAASNSSCPDWYAILGAEPFAPASVLRKRYKQLALLLHPDKSPHVASDEAFKLVAEAFRLLSDRAWKRDYDAKLRLRILDEKENEKAGEEDMDTFWTECSTCRLLHQFERKYVGHNLVCPTCRKSFKAVEVGSDDDGSQEEESEEEEEEEEVEEEEVERAKKGTSGKLKSKEVVDDGERLGDFLLRRKSKNVKGKMGGENGVGLTRSQGLKGGVEGDEVRNEDSESRGEGVEGRLKNGDLKKRTKEKVGIEKAGGLARSRPLKGGVESNEVGNAALESEREGVGGRLRSGDLRKRRHMVGEVLDTSKPKRVKTGEEMMTLAEFQSEVKRTAQQKKMKLKIKENGEDHRTERRSKQGEKPGELKNNKDLEAGEDRSMKKSAMLLVKGKKEDSVKKKEARPEKHRDSGGRDLETMTVVDSDFYDFDKDRTQRCFRKGQMWAVYDDIDGMPRHYALIDEVFSANPFQVGISWFDIQNNGVEKIISCEKMGFHMPCGRFTVAQKASINSVNIFSHIVDCDRVAREVYQVYPKKGSVWALYGKATLDKDGKNFAAKSKRCYDIVVFLTSYSEITGLSMAYLEKVDGYQTVFKRQDMGSHAIRFLGKDDLWLVSHQIPARKLSCEDTPELLKDCWELDPASLSSDLLTVCGIDN 711
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181413g00006 711 CDD DnaJ 73 126 IPR001623 -
Stsc181413g00006 711 MobiDBLite consensus disorder prediction 391 471 - -
Stsc181413g00006 711 MobiDBLite consensus disorder prediction 193 236 - -
Stsc181413g00006 711 PRINTS DnaJ domain signature 93 108 IPR001623 -
Stsc181413g00006 711 PRINTS DnaJ domain signature 75 93 IPR001623 -
Stsc181413g00006 711 PRINTS DnaJ domain signature 109 129 IPR001623 -
Stsc181413g00006 711 MobiDBLite consensus disorder prediction 219 236 - -
Stsc181413g00006 711 MobiDBLite consensus disorder prediction 276 316 - -
Stsc181413g00006 711 MobiDBLite consensus disorder prediction 198 218 - -
Stsc181413g00006 711 PANTHER BNAC03G44070D PROTEIN 11 699 - -
Stsc181413g00006 711 ProSiteProfiles dnaJ domain profile. 73 137 IPR001623 -
Stsc181413g00006 711 MobiDBLite consensus disorder prediction 254 471 - -
Stsc181413g00006 711 Gene3D DnaJ domain 60 162 IPR036869 -
Stsc181413g00006 711 SMART dnaj_3 72 129 IPR001623 -
Stsc181413g00006 711 Coils Coil 201 226 - -
Stsc181413g00006 711 MobiDBLite consensus disorder prediction 344 379 - -
Stsc181413g00006 711 Pfam Domain of unknown function (DUF3444) 474 681 IPR024593 -
Stsc181413g00006 711 Pfam DnaJ domain 73 134 IPR001623 -
Stsc181413g00006 711 SUPERFAMILY Chaperone J-domain 67 137 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181413g00006 Stsc-Chr181413 66071 68591 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181413g00006 10 194 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 34.010 5.02e-26 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181413g00006 - - aip:107642362 1174.84