Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181411g00010 ATGGCTGAAAAACTGTATGGTGGAGCTTACCTCTCTCCCTTTGTTTTTGCTGTTTTGGACAACCTGACTTCAATACTTGAAGAAGAAGACTCATCGCCCGAAAGGAACAACTTGCTTCTAAGGTTGCAGAATTGTCTCTATGAGTTTGGACCTGTTCTTGATGATGCTGAGCTGAAGCAGTTCACTGACAAGAGAGTCAAGAAGTGGCTTGTTGATCTCCAAGATGCTCTCTATTTCGCTGACGACTTCCTCGATGAACTCTCCACTAAAGCCGCCGTCGCTGCTGCTCAAGGGGATCCAGGTAACTCTTCTTCCTGGTCTCGTCTTGTTGATTCATATATTGAAGATACTGGTGACATGGAAAGAATAGTTGGAAGAGTAGAGTCCGTTGTAGCACGCAAAAATTTACTTCGTCTGAAGGAGACTGCCAAGGTGGACATGTCATGGAAAATTCCAACCACATCTCTGGTTGAACCATCAGAGATATGTGGCAGGAAAGAAGACAAGGAGGCCATATTGAAACTGTTGTTGCATGATCATGATGATGCTGGAGATGCTGATTTATCTGTGATTCCCATTGTTGGCATGGGTGGAATAGGAAAGACCACTTTGGCTCAGTTAGTTTACCACGATGACAAAGTGAAGGAGATGTTTGATTTTCGAGGTTGGGTTTGTGTGTCTGAAGAGTTTGATGTTGTCAAGGTCACCAAGACTATAATCGAGGCAATAACTTCGATTCCTTCTTACTTGACAGACTTGAATTTACTTCAACATGATTTAAAGGAAAAGTTGTCAAGGATAAAGTTCTTTCTTGTCTTGGACGATGTATGGAATGAAAATTATGGCGATTGGAATATGCTTCTAAAACCTTTTCAGAAAGGGGTTAAGGGAAGTAAAATTCTCATAACTACTAGAAGTAAGAAGGTGGCTTCTGTGGTCCAAACGGTTTCACCTCATGAATTAAGTTCATTGTCTGATGAAGATTGTTGGTTGGTGTTTTCGAAATATGCTCGTCTTTCAACTGTTTCCATGCAAAATCCAACCCTGGAAAAAATTGGCAGAAAGATCGTAAAGAAATGTTGTGGGTTGCCCTTGGCAGCTCAAGCTCTTGGAGGGTTATTGCGTGGAAATTCTAATGTCAAGTATTGGAATCATTTGCTGAAGAGTGAGATCTGGGAACTCTCCGATGATAGAATAAATGTTGTTCCAGCGTTGAGAATAAGTTATTATTTTCTGCCTTCATATTTGAAGCAGTGCTTTGTTTATTGTTCCTTGTATCCCAAGGACTATGAATTTAGCAAAGATGAATTGATATTGTTATGGATGGCAGAGAATTTTTTGCAACCAGTTGGAAAAAAGACTCCGGAAGAAGTTGGCGATGAATATTTTGATGAATTAATTGCTAGATCATTTTTCCAACCTCATAGTACAGAGGAAAATATATTTGTTATTCATGATCTGGTGCATGATTTGGCAATGATCTTTGCTGGAGAATTTTATTATCGAGCTGGCGATCTTGAGAAGGCTGATGAGGTTGATAGTAAAACTCGTCATTTGTCACATAATGCCAACGGCAATTATCCAATGTCAAAACTTTTGGAAGTTTGTGACAGAGTGAAAAATATAAGGACATTTCTTGAAATCAATTTGAACGAGTGGATTCCATTCAATATTGAAAACTCACCTTGTAACTTGTTGTCAAAGTTGCAGTATCTAAGAGCTTTGTCATTCAAATGGTTTCCTCATGAGTCATTGCCGGATTCAATAGGTGGGCTGATTCATCTGCGCTACTTGGATCTGTCTGAGAGCTACATAGTGACATTGCCAGAGTCATTGGGTTAG 1842 0.3985 MAEKLYGGAYLSPFVFAVLDNLTSILEEEDSSPERNNLLLRLQNCLYEFGPVLDDAELKQFTDKRVKKWLVDLQDALYFADDFLDELSTKAAVAAAQGDPGNSSSWSRLVDSYIEDTGDMERIVGRVESVVARKNLLRLKETAKVDMSWKIPTTSLVEPSEICGRKEDKEAILKLLLHDHDDAGDADLSVIPIVGMGGIGKTTLAQLVYHDDKVKEMFDFRGWVCVSEEFDVVKVTKTIIEAITSIPSYLTDLNLLQHDLKEKLSRIKFFLVLDDVWNENYGDWNMLLKPFQKGVKGSKILITTRSKKVASVVQTVSPHELSSLSDEDCWLVFSKYARLSTVSMQNPTLEKIGRKIVKKCCGLPLAAQALGGLLRGNSNVKYWNHLLKSEIWELSDDRINVVPALRISYYFLPSYLKQCFVYCSLYPKDYEFSKDELILLWMAENFLQPVGKKTPEEVGDEYFDELIARSFFQPHSTEENIFVIHDLVHDLAMIFAGEFYYRAGDLEKADEVDSKTRHLSHNANGNYPMSKLLEVCDRVKNIRTFLEINLNEWIPFNIENSPCNLLSKLQYLRALSFKWFPHESLPDSIGGLIHLRYLDLSESYIVTLPESLG 613
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181411g00010 613 Gene3D - 15 123 - -
Stsc181411g00010 613 PRINTS Disease resistance protein signature 590 606 - -
Stsc181411g00010 613 PRINTS Disease resistance protein signature 190 205 - -
Stsc181411g00010 613 PRINTS Disease resistance protein signature 360 374 - -
Stsc181411g00010 613 PRINTS Disease resistance protein signature 263 277 - -
Stsc181411g00010 613 Pfam NB-ARC domain 168 388 IPR002182 GO:0043531
Stsc181411g00010 613 Gene3D Ribonuclease Inhibitor 503 613 IPR032675 -
Stsc181411g00010 613 Gene3D - 408 493 IPR036388 -
Stsc181411g00010 613 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 148 423 IPR027417 -
Stsc181411g00010 613 Pfam Rx N-terminal domain 14 93 IPR041118 -
Stsc181411g00010 613 SUPERFAMILY L domain-like 484 612 - -
Stsc181411g00010 613 FunFam Probable disease resistance protein At1g63360 409 494 - -
Stsc181411g00010 613 PANTHER DISEASE RESISTANCE PROTEIN RP 69 604 IPR044974 GO:0006952
Stsc181411g00010 613 FunFam Probable disease resistance protein At1g61300 148 317 - -
Stsc181411g00010 613 Gene3D - 144 317 IPR027417 -
Stsc181411g00010 613 Gene3D - 323 407 IPR042197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181411g00010 Stsc-Chr181411 78975 80916 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181411g00010 187 376 WRKY Transcription Factor Family AT5G45050 26.131 7.02e-09 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181411g00010 - - aip:107626318 987.252