Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181410g00006 ATGATGAAGCTGCGAATGGGAACGGGAATAATCCTCATTTCCGCAGCGTTCTTATTGTTGTTATGCCTCCCATTTTCTTCTTCTTCAGTTCCCAATGACGTTTTCTACGGAATCGCTCCTCAAGATGAGAAATATTACAAGTCTTCGGATGCGATAAGATGCAAAGATGGATCGGCAAAATTCACCAAAGAACAGCTCAATGACGATTTCTGCGACTGTCCCGATGGAACCGATGAGCCTGGTACATCAGCATGTCCGGGTGGAAAATTTTATTGCCGGAATGCAGGGCATGTACCTACTACTCTGTTTTCGTCTAGGGTGAACGATGGAATTTGCGACTGCTGTGATGGAAGTGATGAATATGATGGCAAAGTAACATGCCAAAATACCTGCTGGGAGGCTGGGAAAGTTGCTCGGGATAAGCTGAAAAAGAAGATTGCCACATATCAAGATGGTGTCAAGATCCGGAAGGAAGAAATTGAAAAAGCGAAATCAGCTCTGGCTAAGGACCAGGCTGAGCTTTCAAAATTGAAAAAAGAAGAAACCACACTTAAAGACATTGTGCAACAGCTAAAAGAGCATAAAGAAGAAATAGAGAAGGAAGAGGAGAAGGAGCGCTTACAGAAGGAAAAAGAAGAGAAAGAGAAAAAGGAGGCCGAGGAGAAAGCTAATGAAGAAAAATCTGCAGCTACTGGAGAAGAAGCAGGGCATACAAATGAAGCAGGAAAGCATTCAGATGCTGAAGACCATGCTGTGCATGACGCAATGGACGAGCCAGATGATGTAGATGATCGTTATGATGGAGCCACAGATAGCCCTAGTAGTGGTAGATCTCTGCTTAGTGAAGTGGAGGAGAGTGTAAAGAGTGCTGAGGGTGAAGATGCTGCTAAATCAGAAACTGATTTGAAGGTTGAAAAGAAAGAGTCTTCTGAAGAAATAATCAATACGGGGAATGATGCATCTGAAAATACTGAGGGATTATCAAAGGAAGAATTGGGTCAGCTTGTCGCCTCTCGCTGGACAGGGCAAAAGGGTGGTAAGCAAAGTGGTGAAGCTGAAACTGCAAAGAAAAATGAAGAAGAGGAAGATCTCACAACGGAGTCCAATAACGAGGAGTATGAAAACTATGCTTCTGAAACTGACGATGACAGGAGCAAATATGATGGAGAAGATGAAAACGAAGATGACTTTAGAGAGGATGAGCACGATGACGATGGATCCTCTTACAAATCTGACACAGATTTTGAAGGTGAACCAGACTTGTCAGATGGTCCTTCTTGGTTAACGAAAATACAGAGAACTGTACGGAAACTTTTTAAGGCTGTTAATTTCTTCGAGACTCCATTGAATCAGACAGATGCTGCTCGTGTACGAAAGGAATACAATGAGTTGAGTTCCAAGTTGTCAAAATTACAGTCAAGAGTATCAAGTCTGTCAAAAAAGTTAAAACATGATTTTGGTCCAGAGAGTGAGTTCTATTCATTCTATGATCGATGCTTTGAGAGCAAACAAAACAAGTACACTTACAAAGTCTGCCCGTATGACCAGGCTTCTCAGGAGGAGGGCTATTCAACTACCCGTTTAGGCCGCTGGGACAAATTTGAGGACTCCTATAAAGTAATGGCATTTTCTAATGGTGATAAATGCTGGAATGGTCCTGATAGAAGCATGAAGGTTAGGATGAGATGCGGGCTGAAAAATGAGATTACAGATGTGGATGAACCAAGCCGATGCGAATATGTAGCTTTGTTATCTACCCCAGCTCTTTGTAAAGAAGAAAAGCTGAAGGAATTACAACACAAATTAGACGAATTGAATTCACAACAACCTGAAAAACACGACGAGTTGTGA 1851 0.4219 MMKLRMGTGIILISAAFLLLLCLPFSSSSVPNDVFYGIAPQDEKYYKSSDAIRCKDGSAKFTKEQLNDDFCDCPDGTDEPGTSACPGGKFYCRNAGHVPTTLFSSRVNDGICDCCDGSDEYDGKVTCQNTCWEAGKVARDKLKKKIATYQDGVKIRKEEIEKAKSALAKDQAELSKLKKEETTLKDIVQQLKEHKEEIEKEEEKERLQKEKEEKEKKEAEEKANEEKSAATGEEAGHTNEAGKHSDAEDHAVHDAMDEPDDVDDRYDGATDSPSSGRSLLSEVEESVKSAEGEDAAKSETDLKVEKKESSEEIINTGNDASENTEGLSKEELGQLVASRWTGQKGGKQSGEAETAKKNEEEEDLTTESNNEEYENYASETDDDRSKYDGEDENEDDFREDEHDDDGSSYKSDTDFEGEPDLSDGPSWLTKIQRTVRKLFKAVNFFETPLNQTDAARVRKEYNELSSKLSKLQSRVSSLSKKLKHDFGPESEFYSFYDRCFESKQNKYTYKVCPYDQASQEEGYSTTRLGRWDKFEDSYKVMAFSNGDKCWNGPDRSMKVRMRCGLKNEITDVDEPSRCEYVALLSTPALCKEEKLKELQHKLDELNSQQPEKHDEL 616
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181410g00006 616 Pfam Glucosidase II beta subunit-like protein 458 608 IPR036607 -
Stsc181410g00006 616 Coils Coil 454 481 - -
Stsc181410g00006 616 MobiDBLite consensus disorder prediction 403 417 - -
Stsc181410g00006 616 MobiDBLite consensus disorder prediction 385 402 - -
Stsc181410g00006 616 Coils Coil 160 230 - -
Stsc181410g00006 616 PANTHER N-LINKED OLIGOSACCHARIDE PROCESSING 17 616 IPR039794 -
Stsc181410g00006 616 Coils Coil 588 615 - -
Stsc181410g00006 616 MobiDBLite consensus disorder prediction 364 378 - -
Stsc181410g00006 616 ProSiteProfiles MRH domain profile. 462 592 IPR044865 -
Stsc181410g00006 616 MobiDBLite consensus disorder prediction 284 313 - -
Stsc181410g00006 616 MobiDBLite consensus disorder prediction 194 259 - -
Stsc181410g00006 616 Pfam Glucosidase II beta subunit-like 33 179 IPR028146 -
Stsc181410g00006 616 MobiDBLite consensus disorder prediction 194 426 - -
Stsc181410g00006 616 SUPERFAMILY Mannose 6-phosphate receptor domain 499 590 IPR009011 -
Stsc181410g00006 616 Gene3D - 492 590 IPR009011 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181410g00006 Stsc-Chr181410 31373 38440 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181410g00006 26 616 Calmodulin-binding Proteins AT5G56360 54.167 0.0 593
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181410g00006 K08288 - gmx:100807083 790.801