Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181408g00010 ATGGATTCGAAAAGCGATAACGGTAAAGAGTTATCTAGCGACGACGACGCATCTCCGAGATGTGTAATGGAACCTCATGTTTCCGAAACAGAATCTGATTCCGGCAGTAGCAGCAGCAGCAGCTCCTTCTCGCCGGAGAAGCTTCCGCTTCCGCTTCCGCCACCGCCGGCGGTGGCAGCGGCGGGGCTTAGAAAATTGAATTTGAAGGAGAGCAATTTGCAGCAGTGGAAGACGGTGATGGAGGTGTTCAAGTTCAAGAACGTGAAGAAATTGGCGACGATTCCTCTGCTTTCTGCGGGGAACGAAATCACGAGGAGGAAGGGTTTAGCGAAGAAACTGGCTCGGATTCGAAGCGCAGAAGATAGCATCGATATCGGTGTTCTTCCGACGAAGCCTTCTTGGAGGAACTTCGATTACGCGGAGCTCGCAGCTGCAACTAACGATTTCAACCCCGAGAACCTGGTTGGTAAAGGTGGGCATGCAGAAGTGTACAAAGGGCACCTACCTGATGGGCAAGTTATAGCAGTGAAGAGACTAATGAAGAATGCCAAGGATGCTGGGGACAGAGCTGGTGACTTCTTGACAGAACTTGGGATCATTGCACACATAAACCACCCAAATGCAACACGCCTTGTTGGCTTTGGAATTGAACGTGGCCACTACTTTGTACTAGAATATGCTTCACATGGCAGCCTTTCTTCTTTGCTCTTTGGTTCTGAATGCTTGGATTGGAAGACAAGGTTCAAGGTTGCTATTGGGGTGGCAGAAGGGTTGCAGTATCTCCATCAAGATTGTCCTAGAAGAATCATTCACAGGGACATCAAAGCCTCTAACATACTACTCAATGAAAATTATGAGGCCGAGATTTCAGATTTTGGATTGGCAAAGTGGCTTCCAACTAATTGGGCTCACCACATTGTCTTTCCAATAGAAGGCACATTTGGGTACTTAGCTCCAGAATACTTCATGCATGGTGTTGTGGATGAGAAGACTGATGTATTCGCATTTGGGGTTTTGTTACTGGAGATCATAACTGGTCGTCGCGCAGTCGATTCAGATAGTAGGCAAAGCCTTGTGATCTGGGCTAAGCCATTGCTGGATACAATGAATGTGAAGGAAATAGCAGACCCCAGATTAGAAGGGGAATATGATCCTATTGAAATGAAGCATGCCATGGTGATAGCTTCCTTGTGTATCCACCAGATATCGTCCAAGAGGCCATTCATGAATCAGGTTGTAGCCTTACTCAAGGGTGAAGTAGCAGCTATTGAACCCAAACAGAACTCAACAGCAACAAGATCACTCTTGATAGAGGCATGTGACCTTGAGGACTATACTTGCTCTAGATACTTGAAGGATCTCAACCGCCATAGGGAGTTAATCAATGAGTGA 1392 0.4691 MDSKSDNGKELSSDDDASPRCVMEPHVSETESDSGSSSSSSSFSPEKLPLPLPPPPAVAAAGLRKLNLKESNLQQWKTVMEVFKFKNVKKLATIPLLSAGNEITRRKGLAKKLARIRSAEDSIDIGVLPTKPSWRNFDYAELAAATNDFNPENLVGKGGHAEVYKGHLPDGQVIAVKRLMKNAKDAGDRAGDFLTELGIIAHINHPNATRLVGFGIERGHYFVLEYASHGSLSSLLFGSECLDWKTRFKVAIGVAEGLQYLHQDCPRRIIHRDIKASNILLNENYEAEISDFGLAKWLPTNWAHHIVFPIEGTFGYLAPEYFMHGVVDEKTDVFAFGVLLLEIITGRRAVDSDSRQSLVIWAKPLLDTMNVKEIADPRLEGEYDPIEMKHAMVIASLCIHQISSKRPFMNQVVALLKGEVAAIEPKQNSTATRSLLIEACDLEDYTCSRYLKDLNRHRELINE 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181408g00010 463 SUPERFAMILY Protein kinase-like (PK-like) 133 424 IPR011009 -
Stsc181408g00010 463 PANTHER OS08G0249100 PROTEIN 15 430 IPR046958 -
Stsc181408g00010 463 Pfam Protein kinase domain 152 413 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc181408g00010 463 Gene3D Phosphorylase Kinase; domain 1 111 226 - -
Stsc181408g00010 463 MobiDBLite consensus disorder prediction 1 56 - -
Stsc181408g00010 463 Gene3D Transferase(Phosphotransferase) domain 1 228 437 - -
Stsc181408g00010 463 SMART serkin_6 149 416 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc181408g00010 463 ProSitePatterns Protein kinases ATP-binding region signature. 155 177 IPR017441 GO:0005524
Stsc181408g00010 463 MobiDBLite consensus disorder prediction 1 22 - -
Stsc181408g00010 463 FunFam Receptor-like cytosolic serine/threonine-protein kinase RBK1 124 226 - -
Stsc181408g00010 463 ProSiteProfiles Protein kinase domain profile. 149 423 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc181408g00010 463 FunFam receptor-like cytosolic serine/threonine-protein kinase RBK2 228 430 - -
Stsc181408g00010 463 ProSitePatterns Serine/Threonine protein kinases active-site signature. 269 281 IPR008271 GO:0004672|GO:0006468
Stsc181408g00010 463 MobiDBLite consensus disorder prediction 29 46 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181408g00010 Stsc-Chr181408 70978 75696 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181408g00010 137 412 Trihelix Transcription Factor Family AT1G68690 47.018 1.37e-72 239
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Stsc181408g00010 Pkinase 5.3e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181408g00010 - - gmx:100775930 654.055