Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181406g00001 ATGGATGAGGTTATGTTGGTACTTCGAAATCAGTACCGCAAGCTACACACAACAAGATCATGGGACTTCCTTGGTTTGCCTCTAACTGCTGAGAGAAGATTGAAATTTGAGAGTGACATTATTGTTGGTCTTTTGGATACAGGGATCACTCCTGAATCTCAAAGCTTCAAGGATGATGGATTAGGTCCTCCACCAGCAAAATGGAAAGGGAGTTGTGGTCATTATGCTAATTTCTCTGGATGCAATAACAAGATCATAGGAGCCAAATACTTCAAAGCAGATGGAAACTCTGATCCATTAGACATACTATCTCCCATAGATGTTCTTGGCCATGGCACTCACACTGCATCAACAGCAGCAGGCAATCAGGTTCCAAAGGCAAGCCTCTTTGACCTGGCTAGTGGTACGGCCCGCGGCGCAGTTCCCTCGGCCCGGCTGGCCATTTACAAGGTATGCTGGACACTCAGTGGATGTGCAGATATGGACATACTTGCTGCATTTGATGCTGCCATACATGATGGTGTGGATGTCATATCAATTTCCATTGGTGGAGGTGATCCTAGCTATGTGGTTGATCCTATAGCCAATGGCGCGTTTTTCGCAGTTAGTAAAGGGATCATCACAGTGGCCTCTGCTGGAAATGAAGGTCCAGATATGGCGACCGTGACGAATACTGCACCGTGGATTGTTACAGTTGCAGCCAGTGGCATTGACAGGGCTTTCAGGAGCACTGTGGTATTGGGGAGTGGAAAGAATGTTTCTGGAATTGGAGTAGACTGTTTCAATCCAAAACAGAAACAGTATCCTCTCATCAACAGCATCGATGCTGCTCGGAACTCTGAAGCCAAGGAATATGCTAGATACTGCTTTGAAGACTCCTTAGATCCAAATAAGGTGAAGGGAAAGATTGTTTATTGCAAATTAGGAACATATGGCACTGAAGCAATTGTGAAAGGAATTGGAGGCATTGGTACCATAATTGAAAGAGAGAGATATCTTGATATTGCTCAAGTTTTCATGGCTCCTGCTACCATTGTGAATGATAGCTTAGGTGATACTATCACTAGTTATATACATTCCACAAGATCACCATCAGCAGTGATATACAAGACCCATGAAATTAAAAAGCCAGCTCCATTTGCTGCTTCATTCTCATCTAGAGGTCCAAATCCAGGTTCTCAGCATATTCTTAAGCCTGATATTGCAGCACCAGGCATTGATATCTTGGCATCTTATACACTTAGGAGATCAATCACTGGCTTGAATGGGGACACTCAATTCTCAAAATTTAATCTATTATCTGGAACTTCCATGGCTTGTCCTCATGTTGCTGGAGTAGCAGCATATGTTAAGTCATTTCATCCAGATTGGACTCCTGCAGCAATTAGATCTGCCATTATTACCACAGCCAAACCAATGAGCAGGAAAATCAACATTGAAGCAGAATTTGCCTATGGTTCTGGCCAACTAAACCCAACAAGGGCTGTAAACCCTGGTTTAGTCTATGACATGGATCAATTTGGTTACATCCAATTCCTATGCCATGAAGGTTACAGTGGTTCCGCATTATCAGTGTTACTTGGCTCTCCTGTGAATTGCTCTTCTTATTTGCTTCCTGGTGGTGTTATTGGCTATGATGCCATCAACTACCCCACCATGCAACTCATGTTGAAATCAAACAAAGACACAACAGTTGGAATTTTCAAAAGGACAGTGACAAATGTAGGTCTTGGTCCTGCAACCTACAATGCTACTATCAAGTCACCAAAGGGAGTTGAAATCACAGTGAAGCCAACTAGCCTTATGTTTTCTCATACAATGCAGAAGAAGAACTTTATATTGGTGGTGAAAGCTAAATCTATGGCAAGTATGAAAATTCTGTCTGGGTCCCTTATATGGAGAAGCTCAGTTTACTATGTTAGGAGTCCTATTGTTATTTATAGTCCATAA 1950 0.4262 MDEVMLVLRNQYRKLHTTRSWDFLGLPLTAERRLKFESDIIVGLLDTGITPESQSFKDDGLGPPPAKWKGSCGHYANFSGCNNKIIGAKYFKADGNSDPLDILSPIDVLGHGTHTASTAAGNQVPKASLFDLASGTARGAVPSARLAIYKVCWTLSGCADMDILAAFDAAIHDGVDVISISIGGGDPSYVVDPIANGAFFAVSKGIITVASAGNEGPDMATVTNTAPWIVTVAASGIDRAFRSTVVLGSGKNVSGIGVDCFNPKQKQYPLINSIDAARNSEAKEYARYCFEDSLDPNKVKGKIVYCKLGTYGTEAIVKGIGGIGTIIERERYLDIAQVFMAPATIVNDSLGDTITSYIHSTRSPSAVIYKTHEIKKPAPFAASFSSRGPNPGSQHILKPDIAAPGIDILASYTLRRSITGLNGDTQFSKFNLLSGTSMACPHVAGVAAYVKSFHPDWTPAAIRSAIITTAKPMSRKINIEAEFAYGSGQLNPTRAVNPGLVYDMDQFGYIQFLCHEGYSGSALSVLLGSPVNCSSYLLPGGVIGYDAINYPTMQLMLKSNKDTTVGIFKRTVTNVGLGPATYNATIKSPKGVEITVKPTSLMFSHTMQKKNFILVVKAKSMASMKILSGSLIWRSSVYYVRSPIVIYSP 649
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181406g00001 649 FunFam Subtilisin-like protease SBT1.5 39 265 - -
Stsc181406g00001 649 Pfam Fibronectin type-III domain 548 646 IPR041469 -
Stsc181406g00001 649 Gene3D Peptidase S8/S53 domain 39 506 IPR036852 GO:0004252|GO:0006508
Stsc181406g00001 649 ProSitePatterns Serine proteases, subtilase family, serine active site. 435 445 IPR023828 -
Stsc181406g00001 649 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 2 645 IPR045051 -
Stsc181406g00001 649 SUPERFAMILY Subtilisin-like 15 500 IPR036852 GO:0004252|GO:0006508
Stsc181406g00001 649 CDD Peptidases_S8_3 14 470 IPR034197 -
Stsc181406g00001 649 ProSiteProfiles Serine proteases, subtilase domain profile. 20 496 - -
Stsc181406g00001 649 Gene3D - 238 374 - -
Stsc181406g00001 649 PRINTS Subtilisin serine protease family (S8) signature 107 120 IPR015500 -
Stsc181406g00001 649 PRINTS Subtilisin serine protease family (S8) signature 37 56 IPR015500 -
Stsc181406g00001 649 PRINTS Subtilisin serine protease family (S8) signature 434 450 IPR015500 -
Stsc181406g00001 649 Pfam Subtilase family 38 486 IPR000209 GO:0006508|GO:0008236
Stsc181406g00001 649 CDD PA_subtilisin_like 244 368 - -
Stsc181406g00001 649 Gene3D - 513 648 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181406g00001 Stsc-Chr181406 2086 5564 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181406g00001 1 484 Subtilisin-like Serine Gene Family AT4G00230 67.769 0.0 668
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181406g00001 - - ccaj:109800351 1011.91