Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181405g00004 ATGATTATAGCACAAGATGAAATATTTGGCCCTGTCATGTCACTAATGAAATTCAAGACAATTGAAGAGGGAATTAAGAGGGCTAATAACACGAAATATGGGCTAGCAGCAGGAATAGTGACGAAGAACATAGACACAGCAAACACAGTGTCAAGATCCATTCGTGCAGGGGTTATTTGGGTAAATTGCTACTTTGCCTTTGGAAACGACATTCCTTATGGAGGGTATAAACAGAGTGGATTTGGACGAGAATATGGAATGGAAGGCCTCAAACAGTACCTACAACAAAAATCTGTTGTCACTCCAATTTACAACTCTCCTTGGCTTTGA 330 0.4 MIIAQDEIFGPVMSLMKFKTIEEGIKRANNTKYGLAAGIVTKNIDTANTVSRSIRAGVIWVNCYFAFGNDIPYGGYKQSGFGREYGMEGLKQYLQQKSVVTPIYNSPWL 109
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181405g00004 109 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 1 99 - -
Stsc181405g00004 109 SUPERFAMILY ALDH-like 1 108 IPR016161 GO:0016491
Stsc181405g00004 109 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 71 99 IPR016162 GO:0016491
Stsc181405g00004 109 FunFam Aldehyde dehydrogenase, putative 71 97 - -
Stsc181405g00004 109 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 1 70 IPR016163 GO:0016620
Stsc181405g00004 109 Pfam Aldehyde dehydrogenase family 1 99 IPR015590 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181405g00004 Stsc-Chr181405 65712 66135 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181405g00004 1 109 Aldehyde Dehydrogenase Gene Family AT3G24503 73.394 1.44e-53 172
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181405g00004 K12355 - fve:101300557 197.208