Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181405g00003 ATGACATCTCTCTCAAACGGCCACGCCGCTAATGACTCTTCCCCTTCTCCTTCTCCTTCTCCTCTTCCTCCTCCTCCGTTCAAGATCCCACCCATCAAGTTCACCAAACTCTTCATCAATGGCCAATTTGTTCCTTCTCTATCTGGAAAGGAGTTTGAGACAGTAGATCCAAGAACAGGAGAGGTAATAGTGAAAATCTCTGAAGGAAGAAAAGAAGACATTGATGTTGCTGTTAATGCGGCACGTGAGGCTTTTGACAACGGCCCATGGCCACGCATGTCTGGTGTGGAAAGAGCAAGAATCATGATGAAATGGGCAGATCTAATTGAAGAAAACGCAGAAGAAGTAGCAGCTTTAGACGCCATTGATGCTGGAAAGTTGTTCCACTTAGTTAAGGTCTTGGACATCCCTGCAGTTGCAGGTGCTATACGCTACTATGCCGGTGCCGCTGATAAGATCCACGGCGAGGTGCTAAAAGCTTCTAGAGAGTTCCATGCATATACTCTGATGGAACCAATTGGTGTTGTTGGACACATCATCCCTTGGAATTTCCCTAGCACAATGTTTGCTGCCAAGGTTAGCCCTTCCTTGGCTGCCGGTTGCACCATGGTCCTTAAGCCCGCCGAACAAACGCCTTTATCGGCTTTGTTTTATGCTCATTTAGCTAAGCAGGCTGGAATTCCGGATGGAGTTCTTAATGTAGTACCCGGGTTTGGCCCAACTGCTGGTGCTGCAATAAGTTCACACATGGACATTGATAAGGTTAGCTTCACCGGTTCCACGGATGTAGGCCGTGCGATAATGCACGCGGCGGCTAGCAGCAATCTGAAACCGGTGTCACTTGAATTAGGAGGAAAGTCACCTCTTCTAATCTTTGATGATGCTGATGTAGATAAAGCTGCTGATCTTGCTCTCTTGGGAATCCTATTTAATAAGGGAGAAATTTGTGTGGCAAGTTCAAGGGTGTTTGTTCAGGAAGGGATATATGATGAGTTTGAGAAGAAGTTGGTTGAGAAAGCAAAAGCTTGGGTTGTTGGAGATCCTTTTGATCCTAAATCTCAGCAAGGCCCTCAGGTTGACAAGAACCAATTTGAGAAAATCCTTTCATATATAGAGATTGGAAAGCAAGAAGGAGCAACCCTATTGACAGGTGGCAAAAGAGTGGGCAACAAGGGCTACTACATTGAACCTACAATTTTCTCCAATGTCAAGGAAGACATGCGCATAGCACAAGATGAAATATTTGGCCCTGTCTTGGCACTCATGAAGTTCAGGAGCATTGAGGAAGCAATTAAGGGTGCTAACAACAGCAGATATGGGCTAGCAGCAGGAATAGTGACGAAGAACATAGACACAGCAAACACAGTATCAAGATCCATTCGTGCGGGAATTGTTTGGATAAATTGCTACTTTGCATTTGGGAATGACATTCCTTATGGAGGGTATAAGCAGAGTGGGTTTGGAAGAGATTTTGGATTAGAGGGTCTACACAAGTACCTACAAGTTAAATCTGTTGTCACCCCCATTTATAATTCTCCTTGGCTTTGA 1548 0.4503 MTSLSNGHAANDSSPSPSPSPLPPPPFKIPPIKFTKLFINGQFVPSLSGKEFETVDPRTGEVIVKISEGRKEDIDVAVNAAREAFDNGPWPRMSGVERARIMMKWADLIEENAEEVAALDAIDAGKLFHLVKVLDIPAVAGAIRYYAGAADKIHGEVLKASREFHAYTLMEPIGVVGHIIPWNFPSTMFAAKVSPSLAAGCTMVLKPAEQTPLSALFYAHLAKQAGIPDGVLNVVPGFGPTAGAAISSHMDIDKVSFTGSTDVGRAIMHAAASSNLKPVSLELGGKSPLLIFDDADVDKAADLALLGILFNKGEICVASSRVFVQEGIYDEFEKKLVEKAKAWVVGDPFDPKSQQGPQVDKNQFEKILSYIEIGKQEGATLLTGGKRVGNKGYYIEPTIFSNVKEDMRIAQDEIFGPVLALMKFRSIEEAIKGANNSRYGLAAGIVTKNIDTANTVSRSIRAGIVWINCYFAFGNDIPYGGYKQSGFGRDFGLEGLHKYLQVKSVVTPIYNSPWL 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181405g00003 515 Pfam Aldehyde dehydrogenase family 46 505 IPR015590 GO:0016491
Stsc181405g00003 515 MobiDBLite consensus disorder prediction 1 15 - -
Stsc181405g00003 515 FunFam Aldehyde dehydrogenase, putative 477 503 - -
Stsc181405g00003 515 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 39 503 IPR016162 GO:0016491
Stsc181405g00003 515 FunFam Aldehyde dehydrogenase3 285 474 - -
Stsc181405g00003 515 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 285 474 IPR016163 GO:0016620
Stsc181405g00003 515 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 28 505 - -
Stsc181405g00003 515 SUPERFAMILY ALDH-like 27 511 IPR016161 GO:0016491
Stsc181405g00003 515 MobiDBLite consensus disorder prediction 1 26 - -
Stsc181405g00003 515 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 281 288 IPR029510 GO:0016491
Stsc181405g00003 515 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 309 320 IPR016160 GO:0016491
Stsc181405g00003 515 FunFam ALD5p Mitochondrial aldehyde dehydrogenase 39 303 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181405g00003 Stsc-Chr181405 43973 55382 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181405g00003 28 515 Aldehyde Dehydrogenase Gene Family AT3G24503 73.415 0.0 761
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181405g00003 K12355 - gmx:100783920 863.988