Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181399g00005 ATGATTTGCTCTTTGAGACAACCTAGTACAGGGATCACTGGTTCTGGTCTTGTTTTGAGGCAAAAACATGCAACCCCATTTCAACCATCTTCATTATTCTTACCTCCTTTGGGGTTAAAGAAAACACCCCAGAATCATGTTGTTTCTTTGAACAAACCACTGCACCTTGGTGCTGTGAATTTTGGGTCAGTGAAGAAGGATTTTGAGGTTATTGGAAAGAGAAAGAGTGATTATGATTTGGTGAAGTGTGGTGCATATGAGGCAGATAGATCAGAGATTGAAGCAGCTGGTCCATCAGAGGCTGCAAAGAAGGTGAAGATTGGGATANNNNNNNNNNTCAATATTTATAACAAGAAGGTGTTGAATGCATACCCTTATCCATGGCTCACATCAACACTCTCACTTGCTTGTGGCTCTCTCATGATGTTGATCTCTTGGGCCACACGGATTGCTGAAGCCCCTAAGACTGATCTTGAGTTTTGGAAGACTTTGTTGCCTGTTGCTGTTGCACACACAATAGGACATGTTGCTGCAACGGTTAGCATGTCGAAAGTTGCAGTGTCTTTTACTCATATCATCAAGAGTGGTGAACCTGCTTTCAGTGTCTTGGTTTCCAGATTCCTCCTCGGGGAGACCTTTCCTGTGCCGGTCTATCTGTCTTTGGTTCCGATTATCGGTGGATGTGCACTTGCTGCCGTTACCGAGCTCAATTTCAACATGACTGGTTTCATGGGGGCTATGATATCGAATTTGGCATTTGTGTTCCGTAATATCTTTTCAAAGAAGGGCATGAAAGGGAACTCTGTCAGCGGAATGAATTACTATGCATGCTTATCTATTCTATCCCTTGCACTTCTCACACCGTTCGCAATAGCTGTGGAAGGGCCGCAGATGTGGGCGGCCGGATGGCAAGCAGCCGTCTCTCAAATCGGACCCCAATTCATATGGTGGGTAGCAGCTCAAAGCGTATTCTACCATCTATACAACCAAGTGTCATACATGTCATTGGATGAGATCTCGCCTTTGACCTTTAGCATCGGAAACACCATGAAACGTATTTCGGTCATAGTTTCTTCCATCATTATCTTCCGTACACCAGTTCAACCCGTGAATGCTCTCGGAGCTGCCATAGCCGTCCTCGGAACCTTCTTATATTCACAGGCAAAGCAATAG 1173 0.445 MICSLRQPSTGITGSGLVLRQKHATPFQPSSLFLPPLGLKKTPQNHVVSLNKPLHLGAVNFGSVKKDFEVIGKRKSDYDLVKCGAYEADRSEIEAAGPSEAAKKVKIGIXXXXNIYNKKVLNAYPYPWLTSTLSLACGSLMMLISWATRIAEAPKTDLEFWKTLLPVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFLLGETFPVPVYLSLVPIIGGCALAAVTELNFNMTGFMGAMISNLAFVFRNIFSKKGMKGNSVSGMNYYACLSILSLALLTPFAIAVEGPQMWAAGWQAAVSQIGPQFIWWVAAQSVFYHLYNQVSYMSLDEISPLTFSIGNTMKRISVIVSSIIIFRTPVQPVNALGAAIAVLGTFLYSQAKQ 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181399g00005 390 NCBIfam Tpt phosphate/phosphoenolpyruvate translocator 114 389 IPR004696 GO:0016020|GO:0022857|GO:0055085
Stsc181399g00005 390 PANTHER SOLUTE CARRIER FAMILY 35 113 389 - -
Stsc181399g00005 390 Pfam Triose-phosphate Transporter family 112 386 IPR004853 -
Stsc181399g00005 390 SUPERFAMILY Multidrug resistance efflux transporter EmrE 141 233 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181399g00005 Stsc-Chr181399 30965 34086 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181399g00005 29 390 Antiporters AT1G61800 74.474 0.0 530
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181399g00005 K15283 - gmx:100801832 588.571