Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Stsc181398g00009 | ATGAACTCATCATCTTCAAACAATAACTGGCTTTCATTCCCCCTTTCACCAACTCATCCTCCTCCTCAATATCATCAATTCCCTCTTGGCTTTGTCAATGACACCATGGAAAGCCCTTTCCAAAATCATGATTGGAATGTGATAAATGGAGAGAGCAGCAATAACAATAATGATCAAGCAGTTCCAAAGGTAGCTGATTTCCTTGGTGTAACCAAGGCAGAGGAAGATTCATCATCATCAGATCTTGTTGCCCTCACACAAATCCATCAGCATTCATCATCACATGATCAATACCTCTCCACTCTCTTGCCCTTGCAGCACCATCAAAACACCACAACACTTGGCAACATCAACAACTATGAACAACATCAGCAGTGTCACACAAACAATAATAATCTGCAAGCACTGACATTGTCCATGGCAAGTGGCAGCGATAATAATAACAATAATAATAATAAGGATTCAACAACAACAACAAGCTGTGACAATAACAGCAGCAGCACCAACATCACTGTTGAAGCCCCACCTGCTAATAACAGAAGAACTCTAGATACCTTTGGCCAGAGAACTTCAATCTACCGTGGAGTAACAAGGCATAGATGGACTGGAAGATATGAAGCTCATCTTTGGGATAATAGCTGTAGAAGGGAAGGACAATCAAGAAAGGGTCGCCAAGGTGGATATGATAAAGAAGATAAAGCAGCTAGGGCTTATGATTTGGCTGCATTGAAGTACTGGGGAACATCCACTACTACCAACTTTCCTATCAGCAACTATGAGAAGGAATTGGAAGAAATGAAACACATGACAAGACAAGAATTTGTAGCCGCCATAAGAAGGAAAAGTAGTGGATTCTCCAGAGGTGCATCAATGTATCGTGGAGTTACAAGGCATCACCAACATGGGAGATGGCAAGCAAGGATTGGAAGGGTTGCAGGAAACAAAGATCTTTATCTAGGAACATTTAGTACGGAAGAAGAGGCAGCAGAAGCTTATGACATAGCAGCCATAAAGTTCAGAGGCCTTAACGCCGTTACAAACTTCGACATGAGCCGTTACGACGTCAAAGCCATTCTTGAAAGCAATGCTCTCCCAATTGGAGGCGGTGCTGCTAAGAGATTGAAAGAAGCACAAGCATTGGAATCTTCTAGAAAACGAGAAGAGTTGCTTGCACTTGCAGCAGCAGCAGGAGGAACCTCTTCAGCTTCTTTTCATCATCATAACTATGGTGGAGTTGGTGCCTCTTCTTCTTCTTCTGCAAGATTCCCTCTCATGCATCATCAAGAATTTCAGATTCAACCATTGTTAACCCTACAGAACCACCACCAAGATCATTATCAATTCATGCATCATCATCATCATCAGGATCCTTCTTCTTCTTCGACTCCTTCTCCTTCGTCTTCGTCGTCTCTTCATCAGAGCTATCTGCAAACGCAGATTCAGTTGCACCAACAGAATGCTCAGTTTTACAACAATTACCTTCATGGAATGATGAACATTGGTGGTTCTTCTTCTCCTTCTTCTTTTTCGCTCATGGATAACAATAATAATAATAACATGCTTGCTGGTTTGGGTTCGAATTCTTCTTCCGGTAACGTAGTGGGATCTTCTTCAGAGGAACTTGGCTTGGTTAAGGTTGATTATGATATGAATCCCGGCGGTTATGGCGGTTGGCCAGGGACCGCCGAGACAGCGTCGGAGTCCTTGCAGGGACAAAATGGTGGTGTTTTTACAATGTGGAATGATTTGTCAAACTAA | 1758 | 0.4261 | MNSSSSNNNWLSFPLSPTHPPPQYHQFPLGFVNDTMESPFQNHDWNVINGESSNNNNDQAVPKVADFLGVTKAEEDSSSSDLVALTQIHQHSSSHDQYLSTLLPLQHHQNTTTLGNINNYEQHQQCHTNNNNLQALTLSMASGSDNNNNNNNKDSTTTTSCDNNSSSTNITVEAPPANNRRTLDTFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQSRKGRQGGYDKEDKAARAYDLAALKYWGTSTTTNFPISNYEKELEEMKHMTRQEFVAAIRRKSSGFSRGASMYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTEEEAAEAYDIAAIKFRGLNAVTNFDMSRYDVKAILESNALPIGGGAAKRLKEAQALESSRKREELLALAAAAGGTSSASFHHHNYGGVGASSSSSARFPLMHHQEFQIQPLLTLQNHHQDHYQFMHHHHHQDPSSSSTPSPSSSSSLHQSYLQTQIQLHQQNAQFYNNYLHGMMNIGGSSSPSSFSLMDNNNNNNMLAGLGSNSSSGNVVGSSSEELGLVKVDYDMNPGGYGGWPGTAETASESLQGQNGGVFTMWNDLSN | 585 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Stsc181398g00009 | 585 | MobiDBLite | consensus disorder prediction | 140 | 182 | - | - | |
Stsc181398g00009 | 585 | Gene3D | AP2/ERF domain | 291 | 351 | IPR036955 | GO:0003700|GO:0006355 | |
Stsc181398g00009 | 585 | Gene3D | AP2/ERF domain | 192 | 257 | IPR036955 | GO:0003700|GO:0006355 | |
Stsc181398g00009 | 585 | PRINTS | Ethylene responsive element binding protein signature | 193 | 204 | IPR001471 | GO:0003700|GO:0006355 | |
Stsc181398g00009 | 585 | PRINTS | Ethylene responsive element binding protein signature | 331 | 351 | IPR001471 | GO:0003700|GO:0006355 | |
Stsc181398g00009 | 585 | PANTHER | AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR | 63 | 455 | - | - | |
Stsc181398g00009 | 585 | MobiDBLite | consensus disorder prediction | 448 | 474 | - | - | |
Stsc181398g00009 | 585 | Pfam | AP2 domain | 292 | 341 | IPR001471 | GO:0003700|GO:0006355 | |
Stsc181398g00009 | 585 | Pfam | AP2 domain | 192 | 247 | IPR001471 | GO:0003700|GO:0006355 | |
Stsc181398g00009 | 585 | SMART | rav1_2 | 291 | 355 | IPR001471 | GO:0003700|GO:0006355 | |
Stsc181398g00009 | 585 | SMART | rav1_2 | 192 | 261 | IPR001471 | GO:0003700|GO:0006355 | |
Stsc181398g00009 | 585 | CDD | AP2 | 290 | 351 | IPR001471 | GO:0003700|GO:0006355 | |
Stsc181398g00009 | 585 | ProSiteProfiles | AP2/ERF domain profile. | 192 | 255 | IPR001471 | GO:0003700|GO:0006355 | |
Stsc181398g00009 | 585 | SUPERFAMILY | DNA-binding domain | 191 | 257 | IPR016177 | GO:0003677 | |
Stsc181398g00009 | 585 | MobiDBLite | consensus disorder prediction | 458 | 474 | - | - | |
Stsc181398g00009 | 585 | SUPERFAMILY | DNA-binding domain | 290 | 351 | IPR016177 | GO:0003677 | |
Stsc181398g00009 | 585 | CDD | AP2 | 191 | 257 | IPR001471 | GO:0003700|GO:0006355 | |
Stsc181398g00009 | 585 | ProSiteProfiles | AP2/ERF domain profile. | 291 | 349 | IPR001471 | GO:0003700|GO:0006355 | |
Stsc181398g00009 | 585 | FunFam | AP2-like ethylene-responsive transcription factor | 290 | 351 | - | - | |
Stsc181398g00009 | 585 | FunFam | AP2-like ethylene-responsive transcription factor ANT | 191 | 257 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Stsc181398g00009 | Stsc-Chr181398 | 45215 | 47750 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Stsc181398g00009 | 8 | 582 | AP2-EREBP Transcription Factor Family | AT1G51190 | 57.398 | 0.0 | 583 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | AP2 or ERF-AP2 | Stsc181398g00009 | AP2 | 1.8e-08 | CL0081 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Stsc181398g00009 | K09285 | - | gmx:100788471 | 618.231 |