Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181398g00004 ATGCCTGACAGCCTTTTCCTTTTGTTCCTTCTCGCAGCACACCAGAGAGAGAGAGAGAGAGTGTTACAAAACCAGTGTGTGACGAAGCCATTTCACCATTTTTCACTCCTCTCCCTCTCTTACCAAGCAACCAAACCGAGATCAAGCATTGCATTTTCAGCTTCTGTTGCAATCGACGCAGCTGCTGGATTTCTCTGCCTCGATTTCCGCATTTGCGTCGCGTTTAGCAGCTTTATCGAATATTTTGAAGGTCTCACCTATGAACATGTCAATTTCATCTTTTCTGGTGCATCACATGCTCAGGAGAGTTCATACCCATCAACTACAAACTTTTATAAGTTTGGACTTTCTGAACCTGACAGCACTTCATACTATCGTTATAATCATGGTTATGATGAAAATCATCATCATGAACCACTGGTTGACGAATATAGGAGACCTGCGGAAAACTCAACCGCTGTTAATGAACATACAGCTGCTGTAAATACAGAATGGGGAGAAGGGGTAAACAATACAACACGAGACAATTCTATTGAGTGTCCACGAAGACATCATAGTAATTCCAATGATTATCAGGTTGTTTGGCAAGACAGTATTGATCCTGACAACATGACCTACGAGATCTCCATGCTTCCAGTTTCAAAGTACAAGTGTGGGTTCTTCTCAAGGAAGAAGTCTAGGGATGAGAGGAATTATGCTTTCATATATTCTGAGATGGGTTCTGAACTTAGATCTATGTTCAGAGGTATGGAGTATAAAAGAGGGGACAAGCGGATTACTTTGCCTTGTAAACATCTATATCATGCTAGTTGCGGGAACAGATGGCTTAGCATCAATAAGGCTTGCCCTATATGTTACCGGGAAGTATTTTAG 873 0.417 MPDSLFLLFLLAAHQRERERVLQNQCVTKPFHHFSLLSLSYQATKPRSSIAFSASVAIDAAAGFLCLDFRICVAFSSFIEYFEGLTYEHVNFIFSGASHAQESSYPSTTNFYKFGLSEPDSTSYYRYNHGYDENHHHEPLVDEYRRPAENSTAVNEHTAAVNTEWGEGVNNTTRDNSIECPRRHHSNSNDYQVVWQDSIDPDNMTYEISMLPVSKYKCGFFSRKKSRDERNYAFIYSEMGSELRSMFRGMEYKRGDKRITLPCKHLYHASCGNRWLSINKACPICYREVF 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181398g00004 290 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 207 290 IPR033276 GO:0004842|GO:0016567|GO:0046621
Stsc181398g00004 290 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 249 290 IPR013083 -
Stsc181398g00004 290 SUPERFAMILY RING/U-box 251 289 - -
Stsc181398g00004 290 Pfam Ring finger domain 251 285 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181398g00004 Stsc-Chr181398 12184 16834 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181398g00004 73 290 C3H Transcription Factor Family AT3G63530 31.967 8.43e-30 111
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181398g00004 K19045 - gmx:100805963 341.658