Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181395g00015 ATGGCTCCTTCTTCTCCGATTTTTACTGATTCACTGGATCCATCAACACCTCCCGAAACTCTTGACAACGATCTTCAGCCATTCTTCGTTCTTCACAAAGCTTCATCCCGAAGAAAAGATAGATCATCAATAGGACAAGGTAAATTGCGAAAAAGAAATGCGCTGTCTTCACCCCAGAGCACAAAGAAACAGGAAGGAAGTGTGAATGAAGAATACGACTGCCATATGTTTCAGCCACTACAAATTGAAGCCTTCAACAGCATTTGGTCAAGAATTGAGTCCACCATTAAGGATGTTTTGAGAGATCTCAATTCTAGTGTATTTAAAGATATACAGCAATGGATTCTGGAGTGCTTCAATGCTGCTAGATTGCATGGAGAACCTAGTATCGCAGAAGCAACTCGAACCCTTCCTATTCTGAGTAATGCTACTCTTGGTCAACTGTCCACTGCATTGGTTATTACAAGAAATATAGAATTCGTTGATGATATATTGACCTTTGAAGAACTTGGCCATTTCTTGAAATCCCAAGGATGCCATGTAGCCATGCTTTCTTCAGTGGATGTTTCAATGAAGAACGGAATTGCTGGTTGCTTAAAAGCTTTATTGCGAGAGTTTCCACTGGGTGAAATTGATTCAGCTGATATATCAATCCTAGCTTCATGGTATAGAGAGCAAGCCAACAACAATAAACCACTAGTGCTTATCATCAGTGATTTGGAAAGGTGTTGTGGATCTGTCTTAACGGAATTTGTCCTGATGTTGAGTGAATGGGTTGTCAAGTTACCAATCATCTTAATAATTGGAGTTGCAACGACAGTAGATGCCGTAAGAAATGCTCTCCCATCACGTGCTCTTGAGTGCTTATGTTGCTCCAAGTTTATGTTTGGAACACCAGATGAGAGAATGGATACAATTGTTGAGGCTGTTCTTGTGAAACATTTCACTACATTTAATATCGGTCATGAAGTGGCACTCTTTCTGAGAAATTACTTCATCAACCAAGACGGGACATTAACATCTTTTATAAGAGCTTTGAAGTTAGCATGCTTGCTACATTTCTCCGTGGAACCTCTATCTCTCATACATGGGCATATGTTGGCAGAAGACCAAAAGGTCTGTCTTAAACTCTTCAGATTATGT 1143 0.3998 MAPSSPIFTDSLDPSTPPETLDNDLQPFFVLHKASSRRKDRSSIGQGKLRKRNALSSPQSTKKQEGSVNEEYDCHMFQPLQIEAFNSIWSRIESTIKDVLRDLNSSVFKDIQQWILECFNAARLHGEPSIAEATRTLPILSNATLGQLSTALVITRNIEFVDDILTFEELGHFLKSQGCHVAMLSSVDVSMKNGIAGCLKALLREFPLGEIDSADISILASWYREQANNNKPLVLIISDLERCCGSVLTEFVLMLSEWVVKLPIILIIGVATTVDAVRNALPSRALECLCCSKFMFGTPDERMDTIVEAVLVKHFTTFNIGHEVALFLRNYFINQDGTLTSFIRALKLACLLHFSVEPLSLIHGHMLAEDQKVCLKLFRLC 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181395g00015 381 MobiDBLite consensus disorder prediction 49 65 - -
Stsc181395g00015 381 MobiDBLite consensus disorder prediction 1 68 - -
Stsc181395g00015 381 MobiDBLite consensus disorder prediction 1 22 - -
Stsc181395g00015 381 MobiDBLite consensus disorder prediction 33 47 - -
Stsc181395g00015 381 Pfam Origin recognition complex (ORC) subunit 3 N-terminus 76 361 IPR045667 -
Stsc181395g00015 381 CDD Orc3 83 362 - -
Stsc181395g00015 381 PANTHER ORIGIN RECOGNITION COMPLEX SUBUNIT 3 21 370 IPR020795 GO:0003677|GO:0005664|GO:0006260
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181395g00015 Stsc-Chr181395 85722 88392 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181395g00015 1 365 Core DNA Replication Machinery Family AT5G16690 49.731 1.59e-122 368
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181395g00015 K02605 - gmx:100780646 540.036