Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181395g00014 ATGGCAGATGGTGTGGTTTCCTTCCTTCTAGAAAACTTGTCCCAGCTCCTGGCAAGTGAAGCCAAGCTACTATGTGGCTTGAAAGATAGAATCAGATCCCTCCACAGTGAGCTTGAAATTATAAACGTGCTCCTCAAAACCTTTGAAGGGAAGAGGAACAAGAAAGAAATGGACCAAGTTGTTGTCAACCAAATCAGAGATGTTGCTCAGGAAGCTGAGGATGTCATCGACACCTTCGTTGCCAACGTGGCCATCCACAAGAGGAGATCCAAGCTAGGGAGAATGCTCCATGGTGTTTCCCACTCAAAGCTTCTTCATGATGTTGCTGAGAAAATAGAAACCATAAAAGCCACTCTCAGTGATATACGTGACAACAAGATCAAGTACGATGTCTTCCCACAAGAAAGTGGATCATTGTCAACAAGAGAAGATGAAGAGAGGATGCAGTTGTTGCACAAGAGGAGAAGAGATGTGGAGGAACATGATGTAGTTGGTTTCGTCCATGAATCCAAGACAGTCATCAAGCTGCTTATGGAGGAGGGATCAAGGAGCAATGTTGTCTCCATCATTGGTATGGGTGGGTTGGGCAAGACCACCCTTGCTCGAAAGGTCTACAACAGCGATGAGGTGAAGGCATATTTCAATTGTCATGCATGGGTTTATGTCTCAAATGATTGTAGAGTCAAGGAGCTTCTACTTGGCATTCTCAATTGTTTGATGCCTAACCCTGAATATGAATGTAGTGGCAAAAAGAAGGGGAGAAGACAAAAGGGTATAGAGAAACCACAAGACCTTAACACTTTAAGCAAGGATGAACTGAAGCAAAAAGTGCAGGCTTGCTTGAAGAAGAAGCGGTATCTACTAGTCCTTGATGACTTGTGGAATGCTCAAGATTGGGATGAGATACAAGATGCTTTTCCAAACGACAATAATGGTAGTAAAATACTAATTACTAGTCGTTTGAAAGAGATGGCTACACACACTAGTCAAGATCCTCCTTTTTGTCTTCAATTACTTACTGGTGAAGAAAGCTGGGAACTCTTCTCCAAGAGTGTTTTTCGAGGAGAAGAGTGCCCGTTTGATCTAGAGCATCTAGGCAAGCAAATAGTCAAAAGTTGTCATGGTTTGCCACTTTCCATTGTTGTCTTGGCAGGGCTTCTAGCACACAAGGAGAAGTCATACCGAGAATGGTCCAAAGTGGTAGGACATGTCAACTGGTATCTCACTCGAGACGAAACCCAAGTCAAGGACATAGTGCTCAAACTCAGTTATGACAACTTGCCCAGAAGATTAAAACCTTGTTTCCTGTATCTCGGGATCTTCCCAGAAGACTTTGAGATACCTGTTAGGCAACTGCTAGAACTATGGGTTGCCGAGGGATTTATAAAACAATCTGGGACCAGATATCCAGAGGAAGTTGCTGAAGATTATTTGTATGAGCTCATTGAACGTAGTTTGGTTCAAGTAGCACAAATGAAGAGTTTTGGTGGAGGTGTCAAAACATGTCGCATCCATGATCTTCTTCGAGATCTTTGCATTTCTGAGAGCAAAGAAGACAAGCTTTTTGAAATTTGCATGGATAATGACATTTTGGCAAGAAGACAACCTCGCAGGCTATCTCTTCATTGCAGTGTGCCTCACTATGTTTCTTCAAGCAACAATGACCATTCAGTAGTACGTTCTTTATTTTGCTTTAATCAGTACTATCATTTTACTCCAAGCAAGTGGAAAAGGTTTTTCAAACACTTCAAATCTGTCCGAGTATTAGATTTCGGCAGCAACTTTTGTCAAAAGGTCCCTTCTGATTTGGGGTTATTTATCCATTTAAGGTATCTAAGAATATGCTCGCAACATACCAGAATCATTCCAGATTCTATATGTATGCTTCAGAATCTACAGACATTGGACATAGCAGGGCCTTGTAAGATGACTGTCTTGATTTCTTTCCCCAATGAACTGTGGAAACTCAAACAACTAAGGCACTTGCATACGATTAGGCCCGTATCGCTACGTGGCCACTATCAATCAAGAGCAGTTGATGAAGTCATGTGGAATCTTCAAACCATCTCTTTCATTGCACTCAATAAGCAAATAGCATATCTATTTGAGAAAGGAAGCTTTCCAAAACTTCAAAAGTTGGGTTTGCGAATCTCCTCAAGCAAGAAGGGGGAACTGCACAAACTATTACCAAGCCTACAACAACTAAATCATGTGAATAAGAAGTTACAAGTTTTCTTCGAACGGAAGAGCTCCTCAGAAGTGCATTCATCCGTAAGCCACCACATGGAATGGCACATTGGATGCAAGCCACATGAAGTTTTACAAAGCCTGCAACAGTTAACTAATCTGAGTGCATTGGAAATTAACAATGCTTGGGACCTTCCAACATGTCCTGCTGCATTTCCTCTATGCCTTACGAAGCTAACTCTGTCAGGGATCACTTGCATGAATGAGGATGGGATGAATGCCATGGGAAGTCTCACTAGACTTCGAGTTTTGAGATTATGCGGGGTATATTTTTATTCATTAAATGATTCCTTTGAGATTAATTGTGCTGCAAGTAATGGTTTCCCACAGCTACAAGTGTTTGAGATGAAAAAGTTGAAAGTTCATAGCTGGAAATTAACCAATGGTGCAATGCCATACCTTCAGCACTTGCTGATCGAATCTTGTCAACAGTTGGATGATCTCCCAAATGAATTGTGGTCTTCGAGTGCCCTGAGACAAGTGCATGTTATGCAACCCTCTGAAGCATTATCTCTCAGACTAAAAAATATGGAAATGAAGGATGGGTGTGAGCTCATGATCAAATAG 2814 0.4168 MADGVVSFLLENLSQLLASEAKLLCGLKDRIRSLHSELEIINVLLKTFEGKRNKKEMDQVVVNQIRDVAQEAEDVIDTFVANVAIHKRRSKLGRMLHGVSHSKLLHDVAEKIETIKATLSDIRDNKIKYDVFPQESGSLSTREDEERMQLLHKRRRDVEEHDVVGFVHESKTVIKLLMEEGSRSNVVSIIGMGGLGKTTLARKVYNSDEVKAYFNCHAWVYVSNDCRVKELLLGILNCLMPNPEYECSGKKKGRRQKGIEKPQDLNTLSKDELKQKVQACLKKKRYLLVLDDLWNAQDWDEIQDAFPNDNNGSKILITSRLKEMATHTSQDPPFCLQLLTGEESWELFSKSVFRGEECPFDLEHLGKQIVKSCHGLPLSIVVLAGLLAHKEKSYREWSKVVGHVNWYLTRDETQVKDIVLKLSYDNLPRRLKPCFLYLGIFPEDFEIPVRQLLELWVAEGFIKQSGTRYPEEVAEDYLYELIERSLVQVAQMKSFGGGVKTCRIHDLLRDLCISESKEDKLFEICMDNDILARRQPRRLSLHCSVPHYVSSSNNDHSVVRSLFCFNQYYHFTPSKWKRFFKHFKSVRVLDFGSNFCQKVPSDLGLFIHLRYLRICSQHTRIIPDSICMLQNLQTLDIAGPCKMTVLISFPNELWKLKQLRHLHTIRPVSLRGHYQSRAVDEVMWNLQTISFIALNKQIAYLFEKGSFPKLQKLGLRISSSKKGELHKLLPSLQQLNHVNKKLQVFFERKSSSEVHSSVSHHMEWHIGCKPHEVLQSLQQLTNLSALEINNAWDLPTCPAAFPLCLTKLTLSGITCMNEDGMNAMGSLTRLRVLRLCGVYFYSLNDSFEINCAASNGFPQLQVFEMKKLKVHSWKLTNGAMPYLQHLLIESCQQLDDLPNELWSSSALRQVHVMQPSEALSLRLKNMEMKDGCELMIK 937
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181395g00014 937 Gene3D - 5 118 - -
Stsc181395g00014 937 Gene3D - 147 332 IPR027417 -
Stsc181395g00014 937 Pfam NB-ARC domain 172 426 IPR002182 GO:0043531
Stsc181395g00014 937 PRINTS Disease resistance protein signature 373 387 - -
Stsc181395g00014 937 PRINTS Disease resistance protein signature 778 794 - -
Stsc181395g00014 937 PRINTS Disease resistance protein signature 186 201 - -
Stsc181395g00014 937 CDD RX-CC_like 2 124 IPR038005 -
Stsc181395g00014 937 FunFam Probable disease resistance protein At1g61300 146 333 - -
Stsc181395g00014 937 Gene3D Ribonuclease Inhibitor 548 930 IPR032675 -
Stsc181395g00014 937 Pfam Rx N-terminal domain 5 91 IPR041118 -
Stsc181395g00014 937 Gene3D - 339 423 IPR042197 -
Stsc181395g00014 937 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 146 438 IPR027417 -
Stsc181395g00014 937 Gene3D - 424 515 IPR036388 -
Stsc181395g00014 937 SUPERFAMILY L domain-like 503 912 - -
Stsc181395g00014 937 PANTHER DISEASE RESISTANCE PROTEIN RP 45 891 IPR044974 GO:0006952
Stsc181395g00014 937 FunFam Probable disease resistance protein At1g63360 424 514 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181395g00014 Stsc-Chr181395 79330 82243 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181395g00014 187 511 WRKY Transcription Factor Family AT5G45050 24.620 3.56e-07 52.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181395g00014 - - mtr:25492796 1110.9