Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181395g00013 ATGGCAGATACTGTCATTTCCTTTGTCCTAGATAACCTGTCCCAATTGATAGCACGCGAAGCCAATCTGCTATGTGGAGTAGATGACAGGGTTAAATCCCTTCATAGTGAGCTCAGAATGATAAACGTGCTTCTCAAAACCTCTGATGGTAAAACCAAGAAAGAAATTGAGAAAGAAGTTCTTAGCCAGATCAGAGATGTTGTTCACGAAGCTGAGGATGTCATCGACACCTTTGTTGTCAACATGGCCATACAAAAGCGTAGAACCAAGCTGGAGAGGATGCTCCATGGCTTTGACCATGCAAAGTTGCTCCATGATGTGGCTGAGAAAATAGACACAATCAAAGCTGCTATAAATGAAATAAGAGACAACAAGATCAAGTTTGCTGATGTCTTCCCACAAGAAAGTGAATCTTCATCGTCAACAAGAGAAGATGAGGAGAAGCTGCTGTTGCTGCACAAGAGGAGAAGAAATGTGGAGGAACATGATGTAGTTGGTTTTGTTCGCGAATCTAAGGAAGTCACCCAGCTGCTTGAGGAAGAGAGTTCCCAAAGCAGTGTTGTCTCCATCATCGGTATGGGTGGGTTGGGCAAAACCACCCTTGCCCGAAAGGTCTATAACAGCGATGAGGTGAAGTCATATTTCAATTGTCGTTCATGGGTTTATGTGTCAAATGACTGCAGGGTTAAGGAGCTTTTGATTGACCTTATCAAGTGTTTGATGCCTAACCCTGAATACAAGAATGGAAGGAAAAAGAAGGGCAAGAAACAAAAGGGAATAGAGAAACCAGGTGACCTCTCTAGCTTGAGTGTCAATGAACTAAAGCTCATGGTGCGAGATTTCTTGACCACGAACAAGTATCTGGTAGTCCTGGATGACCTCTGGAAGACTCAAGATTGGGATGAGATACAAGATGCTTTTCCAAACGACAATAATGGTAGTAAAATACTAATTACTAGCCGTTTGAAAGAGGTGGCGTCCCATACAAGTCCATATCCTCCTTATTACCTTCAATTACTCGGTGATGATGAAAGTTGGCAACTCTTCTCCAGGAAAGTGTTTCAAGGAAAAGAGTGTCCTTCTGAAATAGAGCATCTTGGAAAACAAATGGTGAAAAGTTGTGGGGGTTTGCCACTCTCCATTGTTGTTTTGGCAGGGTTGCTGGCAAACAAGGGGAAGTCACACAGGGAATGGTCCAAAGTTGTGGGACATGTGAACTGGTATCTTACTCGAGATGAGACCCAAGTTAAGGACATTGTTCTCAAACTCAGCTACGACAACTTGCCTACAAGGTTAAAGCCTTGCTTTCTGTATCTTGGGATGTACCCTGAAGATTTTGAGATACGTGTAAGGCCATTGCTGCAAAAATGGGTTGCTGAGGGATTCATACAACAAACTGGGACGAGATATGCAGAAGATGTTGCTGAAGATTACTTGTATGAGCTCATTGATCGAAGTTTGGTTCAAGCATCACGAGTGAATGTTAATGGAGATGTGAAGGCATGTCGCATCCATGACCTTCTCCGTGATCTTTGCATATCTGAGGGCAAAGAGGACAAGCTTTTTGAAGTTTGCATAGATAGTAACATTTTGGAAGGATCAAAACCTCGCAGGCTTTCTATCCAATGCGAGATGGATCGCTATGTTTCTTCAAGCAACAATGACCATTCATGTGTCCGTTCTTTGTCTAGCCATGACCGGAGGTATTCTTTTTCCCCAAGTGACTGGAAATGGCTTTTTGAATGGTTCAAATTGGTTCGTACATTAGATCTTGAGATCCACGAATGCAAAAGAGTTCCTTCCGATATGAGTTTATTTATCCATTTACGGTATTTAAGAATATACACAACAACAAGAACCCGAGATATTCCAGATTCTATATGCACACTTCAAAATTTACAAACATTTGACATATGCTGTATATTTCAACCGTTACAATCAATATATTTCCCAAGTGGACTCTGGACCCTGAAACAACTTAGGCATTTGAACACTAATGGAATCATCATCATACGTGGCCACCATGGTTCAAAAGCAGATGATCAAGTTATGTGGAATCTTCAAACCATGTCTTCCATTGCATTCAATAGACAGATTGCACACATAATAGCGAAAGGAAGGTTTCCCAAGCTACGAAAGTTGGGTTTGCATATCTTCTCGGTCCACAAAGATAATGCTCTTGACTTGTTTTCAAGCCTAAAACGATTAACTCATCTGAACAAGTTAAAACTTTTCTTTGAATGGAAGAGATACAAGGCCACAAAGTCCTCAAACTACAAGCACATGGAATGGCACATCGGTTGCAAGCCAATTGAATTGTTACAGAGCCTGCAGCAATTGTCAAATCTCAGCACATTAAAGGTTATTGCAGCTTTGGACCTTGCCACGTGTGATATTGCATTTCCTCCATGCATTACAAAATTAACGCTGACGGGAATTAGCTTCATGAATGATGATGGGATTAATGCAATCGGTAATCTTACTAGGCTCCAAATTCTGAGATTAAGTGGAGTAAGTAAATTTGAGGATTATTTTGAGATTAAGTGCATTGAAGGTAGTTTCTCACAGCTCCAGGTTTTTGAGATGGAAGATCTGAATGTTCAGAGCTGGAAATTAGGCAATGGTGCAATGCCATGCCTTCAAAGTTTGCTTATTATGTGCTGTGACAGATTGGACAGTCTCCCAGATGAATTGTGGTCTTTGAATTCCCTGAGACAAGTACAAGTTGTGGAACCCTCCCAAGCATTGTCTCTTGCACTAGGAAATTTGGGAATGAAGGATGGATGTGAGCTCATAATCAGAAAGTTGAGTTTGAATTAA 2820 0.4128 MADTVISFVLDNLSQLIAREANLLCGVDDRVKSLHSELRMINVLLKTSDGKTKKEIEKEVLSQIRDVVHEAEDVIDTFVVNMAIQKRRTKLERMLHGFDHAKLLHDVAEKIDTIKAAINEIRDNKIKFADVFPQESESSSSTREDEEKLLLLHKRRRNVEEHDVVGFVRESKEVTQLLEEESSQSSVVSIIGMGGLGKTTLARKVYNSDEVKSYFNCRSWVYVSNDCRVKELLIDLIKCLMPNPEYKNGRKKKGKKQKGIEKPGDLSSLSVNELKLMVRDFLTTNKYLVVLDDLWKTQDWDEIQDAFPNDNNGSKILITSRLKEVASHTSPYPPYYLQLLGDDESWQLFSRKVFQGKECPSEIEHLGKQMVKSCGGLPLSIVVLAGLLANKGKSHREWSKVVGHVNWYLTRDETQVKDIVLKLSYDNLPTRLKPCFLYLGMYPEDFEIRVRPLLQKWVAEGFIQQTGTRYAEDVAEDYLYELIDRSLVQASRVNVNGDVKACRIHDLLRDLCISEGKEDKLFEVCIDSNILEGSKPRRLSIQCEMDRYVSSSNNDHSCVRSLSSHDRRYSFSPSDWKWLFEWFKLVRTLDLEIHECKRVPSDMSLFIHLRYLRIYTTTRTRDIPDSICTLQNLQTFDICCIFQPLQSIYFPSGLWTLKQLRHLNTNGIIIIRGHHGSKADDQVMWNLQTMSSIAFNRQIAHIIAKGRFPKLRKLGLHIFSVHKDNALDLFSSLKRLTHLNKLKLFFEWKRYKATKSSNYKHMEWHIGCKPIELLQSLQQLSNLSTLKVIAALDLATCDIAFPPCITKLTLTGISFMNDDGINAIGNLTRLQILRLSGVSKFEDYFEIKCIEGSFSQLQVFEMEDLNVQSWKLGNGAMPCLQSLLIMCCDRLDSLPDELWSLNSLRQVQVVEPSQALSLALGNLGMKDGCELIIRKLSLN 939
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181395g00013 939 FunFam Probable disease resistance protein At1g63360 425 514 - -
Stsc181395g00013 939 Gene3D - 340 424 IPR042197 -
Stsc181395g00013 939 Gene3D - 425 515 IPR036388 -
Stsc181395g00013 939 CDD RX-CC_like 2 123 IPR038005 -
Stsc181395g00013 939 PANTHER DISEASE RESISTANCE PROTEIN RP 33 885 IPR044974 GO:0006952
Stsc181395g00013 939 Pfam NB-ARC domain 175 427 IPR002182 GO:0043531
Stsc181395g00013 939 Coils Coil 104 124 - -
Stsc181395g00013 939 Gene3D - 5 123 - -
Stsc181395g00013 939 Gene3D - 150 331 IPR027417 -
Stsc181395g00013 939 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 155 439 IPR027417 -
Stsc181395g00013 939 SUPERFAMILY L domain-like 495 907 - -
Stsc181395g00013 939 PRINTS Disease resistance protein signature 825 841 - -
Stsc181395g00013 939 PRINTS Disease resistance protein signature 187 202 - -
Stsc181395g00013 939 PRINTS Disease resistance protein signature 374 388 - -
Stsc181395g00013 939 FunFam Probable disease resistance protein At1g61300 151 332 - -
Stsc181395g00013 939 Pfam Rx N-terminal domain 5 90 IPR041118 -
Stsc181395g00013 939 Gene3D Ribonuclease Inhibitor 542 923 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181395g00013 Stsc-Chr181395 75004 77877 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181395g00013 165 511 WRKY Transcription Factor Family AT5G45050 24.000 9.84e-08 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181395g00013 - - aip:110269956 1127.46