Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181395g00008 ATGATAGTTGTTAATGTAGTTTGGAATTACCTTCTAGATGATTTCAGCATTGAGAGTGTGTTTCTGCATGCTAGGGCCTTGGGTTTGATCAACCATGATGTACCGGAGAACCGGTTGAGGTATTACGAGAATCAGGAAAAAAAGTCTGTCAAACATTCTATGATCCAGAACGCTGATATGAAACCTGAATCAGGGACTTGTAATATTTGTTCAGCTCCTTGTTCATCTTGCATGCATCTTAATCGAGCTCTAACTGGAACAAAGGCTGAAGAATTCTCTGATGAAAATTGTCGCTCAGGGGAGGCCAGTCAGCTTTCTATGGAAGTGGATGATCTATCTTCTCATAGGAAAACAGCTTGTGGAAGAACGAAGCATGCTGTCAATGAAACCAGTAATTTGCTTACTGTTAATTCCAGTCATGAATCTCTGTCTGAAAATGCCGAAACAACACAAACTTTATCAGAGAAGTATCATGATGTCAAGTGTTTAGAAGGACCTGATGACAGCGCTTCTTGTATCAGTAGAAACAGTAATGCTAATTTAGTTAGTAATAGCCATCAAAGTAACTCAGACAAAATAAATATTTCTTGTAGTTCACCCTCAGCTAGTCACTTAGGAGCAGAAGGATCTACAAGTGGGCCATCTGTTTATATATCTGGCTTGTGTGAGATACCCTCTTCTAAAGATGCAGATATGCCAGAGAATTTATCAGAATGTTGTGTTGGAAATGTTGAGTCATTGCCAACCAAGGAGATAGTAACTGCTAATTTTTCCAGTGAAAAATCTCTTGCAGATAATGATGGCCTTGTTAATGGCATTACTGGCAAGGTTTCAGCCAAAGTATATCCAAAGTCAGAAACAGATAGTGATAATGATGTTGGTGACGTGAAAGACAAAGGTCATAAAGTTCCAGTCCATGATGGACTGCACAAGAAGCAGGGGGAGCTTGTTAAATCACCCGTCAAACCTGAAGCTCAATCTGGAGATGAGAGCGATGACTCAGATATTGAGCATGATGTAAAGGTATGTGACATCTGCGGAGATGCTGGTCGCGAGGAGCTACTTGCAATATGTAGTAGATGCAGTGATGGTGCAGAGCACACCTATTGCATGAGAGAAATGCTTGAAAAGGTCCCAGAAGGAGACTGGTTATGTGAAGAATGCAAGTATGCTGAGGAGACTGAAAAACAAGGGTTGGATGTTGAAGAGAAAAAGGTTCATAAAGTTAGTTCAACTGCGCAAATCTCTGGTAAAAGGCCTTCTGAGAGTGAAGAATTGGCAAAGACAGGTAAAAAGCAAGCTCTTGAATCAAGCAAAGGGTCACCAAAGGGTTCAAGCCCGAAGAAAATATTTCCACTGTCGCGAGAGTCTTCCTTCAAGAACATAGACAAAGGAAAGTTGAAATCTGATCATCAGGCCTCTATTTGTAACCACCCCGATGGCAATGACATAGAACTTGCTCGTTCTCTTTCTGCTGGTCCTCGGAGTCAAACAACTAAGAGTACATTGTTAAAGTCTAATTCTTTCAACAACATCAATTCGAAGCCCAGAGTCAAACTTGTTGATGAAGTCCCACAAAAAAAGAAAGGGGCTGGTGAACATACCTCTAAGAATATTGAGATGCCAGGACGAATGATAAGCAAATCTACTTCATTGAAATCCTCAAATTTGGGCCGTTCATGTGCCGCTGAATCAAAAGTCAAAATGGTTACTTCAAAACCTGGAACTACTGTGGATCAAAAAGGATCTAAACTAGCAAAAGAATCAGGTGCCTCTGAGAGGAAATTTTTCTCTAGGGTTGATTGTCCTGTTGTTTGTTCAACCATGGCTAGTTCTGCTGTTCTGACATCTAAGAGTGATCAGAAGCTTACCCCACGTAGTGAAACTGCTAAACCTTCGGTAACTAACAACAATCGTGAATTTAAGGTCAACCAAGATGGGAGATCAAATTCATTATTGAAGTCTAAGAATAATATAAGCCAGAGAACATCAAAAAGTGGTGATGAAACTCAATTAGATGGGCTGCCTCAATCAAAAGAGATATCATATCAGGTTGATAAAGCCAAAGATAGTTCCGGTGATTGTGTGAGGTCCAGTCTTACTAATGCTTCTGATAGCCCTTTCTGTCACAAATGTAAGGATTATGGCCATGCTACAGAAGATTGCATGGTTGATAAACAGGAATTTGGTCTGGAAGGATCAGCCACTGCTCCAAACAGTTCAAAAGACGAAACACATAAAGATAATAGACTGAAAGCTGCAATCCAGGCAGCTTTACTTAGAAGGCCTAAAATATGCAAGAGGAAAGAAGTGCCTGCCCAAACTGAGGAGTTTCTTAAATCAGCCACAGACATAAAGTCTGAAGTCACTTCTCAAGATAAGGTGTTTGTTATTGACACGCCAAAGAATATTGTTTCTACTGAAGAAACAAAAGTGAGGCAGGAGATCCTTCAGAATCCTACATTTGAAACTCTGTCTTCCAATGATTCGAAGCAACATATCTTTTGTCCAGCTGATTTTGGATCACAACCTAGAAAGCTAGAATCTGTTGGTCTGCCTCCTGGAATTCCGGCGGTTGGAGACTTCCACAACCAAGCTTTGGCTGTCTCAAGAGTTCTTCCAAAGATATCAGTCTTTCCAGAATATGAATACATTTGGCAAGGTGTCTTTCGAATGCATAGAAGTGGAAAGCCCCCTGACTTATGTACTGGTATTCAAGCACATTTATCCACATCTGCTTCCCCTAAGGTTCTTGAGGTAGTGAACAAGATTCTACCTGAGGTTTCCCTCAATGAAGTTTCTCGCTTGAGCACATGGCCTACGCAATTTCATCAAGGCGGGGCTAGGGAAGATAATATTGCTCTTTACTTTTTTGCCAAAGACATTGAAAGTTATGAGAGACACTACAAGGGTCTGTTGGATCACATGATTAGAAATGATTTGGCGCTTAAAGGAACTTTTGATGGCGTTGAACTTCTTATATTCCCGTCAAATCAGCTTCCTGAAAATTCTCAGCGTTGGAATATGTTGTTTTACTTATGGGGCGTATTTAGAGGGAAGAGAATGAATCATTCTGATTCTGCACAAAATATTTGTAGTCCCAGTTTGAATGCTTTGCCAGTTCAGAAAGATTTTCCAACTGCTGTGATGACTTTGTCTGAAACCCACTGCTCACCGAAGCGGATGGATGAACAATCAATTGCTTGTGGTAAAACCTGCAGTGAAGTTCTCTCATCCACTTCCATGGACCAAGGCCATAATATTTTAAGTGGGAATTTTGATATTAAAGAAAGTATTTTTGACCAGGCACGGTTGGGTTCACAAGTAAACTTACAGAGGCAAGATAGTAGAATCAACACGGAATCTGCATCAAAGAATCCGACAAGCAGTGAACAATTGGGCCAAGAAATGCGCTCTCCGGGTTCACCCCTGAAAGATGGACAACACAGAGTCCCCACTCCTCCTGAAGCAATGGGAACGCATGTAAGTAGCAAGATTGTGGAAACAAACAGTGATTGTGATATTTCAGTCAGGCTCGAGAACTCTCTGTCTTCTGGGATTCCTTCTGCTGGCAAACAAGAGATCGATGCGGCAAGCAATACCTCAAAGAATCAAATTTCAGAAAGAACTAACAGTTATGAAGATCAACGGAGGCCTAAAAGGAAACTGATAGAAGAAGATCTCAATATTAACATGGAGGCAACCCTTCAAGAAGACCCGACTATAAGGGGCATCAATTGTGAGCAAACTAATGATAATAAAATACAGCATATAGATGTTTCAGATGCAGTTTTGAAGGCTTCTGAAGATAGTTATCAGAAATTGCCTTGTGATAAGGTGAATGGAAAATTGGAAGATGGAGTAAGTTCCAGCAAGAAGCTTAAATCAAGTTTCAGTGATATGATTGGAAGTTGCAGTTCAGGAGGTGGAGAATCTTTCAATGGCAGTTTTACAGCCCTTGCAAACCATCCCAGTACCTTCTCTTCAGTTGAGGGTACAGGATGCAAAGAAGCTTGCTTGGATAAAGTCATTCAAGAGGACCTTGGAACTACAGAAAGAACCTTCTTTCCTGTCGGTTCGCATCAGAAAAATGACTCGCGATGGATGCTTAATGGGATGCCACTGGAGGGGCCTTGTGAGTATAAGGGTCAATTTCAAGTTGGCATTCCAAATCTAGAACTTGCTTTGGGGGGTGAAACAAAACCACAGCCACCACCGGCGCCGCCACTACCACCGCATAAGGGTATGTTCCCTTTTCTTGCCGGGGCTGTAGACAAGAAACATAACCAGGAAAAACCGCCTCAAGTAGTGGCAGATGAGCAAGAGGGCGATGACAATGTTGCTGCATCACTTTCCCTGTCTCTATCATTCCCATCTTCGAATAAGGAATCTGTCAAACCTGCTCCAAAAGCTGAAGATTCGCCTGATGGGCAAAATGTGAATACTTCGTTTCTCCTTTTCGGGAGATACACAGACAAATAA 4482 0.4143 MIVVNVVWNYLLDDFSIESVFLHARALGLINHDVPENRLRYYENQEKKSVKHSMIQNADMKPESGTCNICSAPCSSCMHLNRALTGTKAEEFSDENCRSGEASQLSMEVDDLSSHRKTACGRTKHAVNETSNLLTVNSSHESLSENAETTQTLSEKYHDVKCLEGPDDSASCISRNSNANLVSNSHQSNSDKINISCSSPSASHLGAEGSTSGPSVYISGLCEIPSSKDADMPENLSECCVGNVESLPTKEIVTANFSSEKSLADNDGLVNGITGKVSAKVYPKSETDSDNDVGDVKDKGHKVPVHDGLHKKQGELVKSPVKPEAQSGDESDDSDIEHDVKVCDICGDAGREELLAICSRCSDGAEHTYCMREMLEKVPEGDWLCEECKYAEETEKQGLDVEEKKVHKVSSTAQISGKRPSESEELAKTGKKQALESSKGSPKGSSPKKIFPLSRESSFKNIDKGKLKSDHQASICNHPDGNDIELARSLSAGPRSQTTKSTLLKSNSFNNINSKPRVKLVDEVPQKKKGAGEHTSKNIEMPGRMISKSTSLKSSNLGRSCAAESKVKMVTSKPGTTVDQKGSKLAKESGASERKFFSRVDCPVVCSTMASSAVLTSKSDQKLTPRSETAKPSVTNNNREFKVNQDGRSNSLLKSKNNISQRTSKSGDETQLDGLPQSKEISYQVDKAKDSSGDCVRSSLTNASDSPFCHKCKDYGHATEDCMVDKQEFGLEGSATAPNSSKDETHKDNRLKAAIQAALLRRPKICKRKEVPAQTEEFLKSATDIKSEVTSQDKVFVIDTPKNIVSTEETKVRQEILQNPTFETLSSNDSKQHIFCPADFGSQPRKLESVGLPPGIPAVGDFHNQALAVSRVLPKISVFPEYEYIWQGVFRMHRSGKPPDLCTGIQAHLSTSASPKVLEVVNKILPEVSLNEVSRLSTWPTQFHQGGAREDNIALYFFAKDIESYERHYKGLLDHMIRNDLALKGTFDGVELLIFPSNQLPENSQRWNMLFYLWGVFRGKRMNHSDSAQNICSPSLNALPVQKDFPTAVMTLSETHCSPKRMDEQSIACGKTCSEVLSSTSMDQGHNILSGNFDIKESIFDQARLGSQVNLQRQDSRINTESASKNPTSSEQLGQEMRSPGSPLKDGQHRVPTPPEAMGTHVSSKIVETNSDCDISVRLENSLSSGIPSAGKQEIDAASNTSKNQISERTNSYEDQRRPKRKLIEEDLNINMEATLQEDPTIRGINCEQTNDNKIQHIDVSDAVLKASEDSYQKLPCDKVNGKLEDGVSSSKKLKSSFSDMIGSCSSGGGESFNGSFTALANHPSTFSSVEGTGCKEACLDKVIQEDLGTTERTFFPVGSHQKNDSRWMLNGMPLEGPCEYKGQFQVGIPNLELALGGETKPQPPPAPPLPPHKGMFPFLAGAVDKKHNQEKPPQVVADEQEGDDNVAASLSLSLSFPSSNKESVKPAPKAEDSPDGQNVNTSFLLFGRYTDK 1493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181395g00008 1493 MobiDBLite consensus disorder prediction 1109 1161 - -
Stsc181395g00008 1493 MobiDBLite consensus disorder prediction 1425 1439 - -
Stsc181395g00008 1493 MobiDBLite consensus disorder prediction 1401 1415 - -
Stsc181395g00008 1493 MobiDBLite consensus disorder prediction 1183 1209 - -
Stsc181395g00008 1493 MobiDBLite consensus disorder prediction 615 678 - -
Stsc181395g00008 1493 ProSiteProfiles Zinc finger PHD-type profile. 340 391 IPR019787 -
Stsc181395g00008 1493 MobiDBLite consensus disorder prediction 283 335 - -
Stsc181395g00008 1493 PANTHER - 340 1053 - -
Stsc181395g00008 1493 SMART PHD_3 342 389 IPR001965 -
Stsc181395g00008 1493 MobiDBLite consensus disorder prediction 283 318 - -
Stsc181395g00008 1493 MobiDBLite consensus disorder prediction 1183 1220 - -
Stsc181395g00008 1493 MobiDBLite consensus disorder prediction 1395 1493 - -
Stsc181395g00008 1493 MobiDBLite consensus disorder prediction 1447 1463 - -
Stsc181395g00008 1493 MobiDBLite consensus disorder prediction 566 592 - -
Stsc181395g00008 1493 MobiDBLite consensus disorder prediction 491 515 - -
Stsc181395g00008 1493 MobiDBLite consensus disorder prediction 461 480 - -
Stsc181395g00008 1493 MobiDBLite consensus disorder prediction 1109 1137 - -
Stsc181395g00008 1493 MobiDBLite consensus disorder prediction 615 679 - -
Stsc181395g00008 1493 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 284 403 IPR013083 -
Stsc181395g00008 1493 MobiDBLite consensus disorder prediction 410 456 - -
Stsc181395g00008 1493 SUPERFAMILY FYVE/PHD zinc finger 330 394 IPR011011 -
Stsc181395g00008 1493 MobiDBLite consensus disorder prediction 1475 1493 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181395g00008 Stsc-Chr181395 43535 50300 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181395g00008 339 400 C2H2 Transcription Factor Family AT3G01460 32.258 4.61e-06 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181395g00008 - - adu:107477384 1930.61