Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181395g00006 ATGATAAATAGCATTAACTGCAGTGTTGTAGAGACTGTTGGCGATGAAGTCAAGAATCTGAAAGAAGGGGATATGGTGATTCCAACATACATAGGAGAGTGCCAAGAATGTGAGAATTGCATTTCAGGAGAATCAAATTTGTGCTTGACATATCCTCTGAGACTGTGTGGCTTGATGCTAGATAACACCTCAAGGATGTCCTGCAGAGGCCAGAAGTTATACCACCCTATGGGTTCCGCCACATGGTCCGAGTACACAGTTATTGATGTTAACTACCTTGTGAAGGTTGATCCAAGCATGAATCCAGCCCATGCCAGCTTCATCTCATGCGGATTCTCAACTGGCTATGGAGCTGCATGGAAGGAAGCCAGAGTTGAAAGAGGATCAAGTGTAGCTGTTTTTGGTCTTGGTGCTGTTGGATTAGGGGCTATAAGTGGAGCAAAAATGTTGGGGGCAACTAAGATAATTGGGATTGACACAAATGAAATGAAGAGAGAAAAAGGTGAAGCTTTTGGAATGACTCATTTTATAAATCCAAGTAGTTCAGATAAATCTCCTTCAGAATTGGTGAAGGAACTAAATGGTGGAATGGGTGTGGATTATTCCTTTGAGTGCACAGGAGTTGGCCCTTTGCTTACTGAAGCATTAGAAGCTACAAAAGTGGGATTAGGTAAAACAATAACAGTTGGTATAAGAGCTGAAAACTTTGTACCAGTTGGTCTGTTATCTATTCTTTTTGGAAGAACTTTGAAAGGATCAATTTTTGGTGGGTTAAAAATCACATCAGACCTACCCATCATAGCTGACAAATGCATTAAACAGGAATTCCCTCTTCAAGAACTGTTCACCCACGAGGTCCAATTGACAGACATAGAACAAGCATTTGAGCTCTTGAAACAACCCAATTGTGTGAAAGTTGTCATAAAGATATGA 933 0.4084 MINSINCSVVETVGDEVKNLKEGDMVIPTYIGECQECENCISGESNLCLTYPLRLCGLMLDNTSRMSCRGQKLYHPMGSATWSEYTVIDVNYLVKVDPSMNPAHASFISCGFSTGYGAAWKEARVERGSSVAVFGLGAVGLGAISGAKMLGATKIIGIDTNEMKREKGEAFGMTHFINPSSSDKSPSELVKELNGGMGVDYSFECTGVGPLLTEALEATKVGLGKTITVGIRAENFVPVGLLSILFGRTLKGSIFGGLKITSDLPIIADKCIKQEFPLQELFTHEVQLTDIEQAFELLKQPNCVKVVIKI 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181395g00006 310 Gene3D - 7 305 - -
Stsc181395g00006 310 Pfam Zinc-binding dehydrogenase 138 257 IPR013149 -
Stsc181395g00006 310 FunFam S-(hydroxymethyl)glutathione dehydrogenase 115 253 - -
Stsc181395g00006 310 Gene3D - 115 253 - -
Stsc181395g00006 310 SUPERFAMILY GroES-like 9 125 IPR011032 -
Stsc181395g00006 310 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 100 271 IPR036291 -
Stsc181395g00006 310 PANTHER ALCOHOL DEHYDROGENASE 8 302 - -
Stsc181395g00006 310 Pfam Alcohol dehydrogenase GroES-like domain 9 96 IPR013154 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181395g00006 Stsc-Chr181395 36881 38369 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181395g00006 9 302 Monolignol Biosynthesis Gene Families AT2G21730 24.497 8.79e-07 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181395g00006 K00121 - gmx:100798341 472.626