Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181395g00003 ATGGAAATTTCAGGTGCAGTATGTTGGAAGGTTGGGGAGGCTGTGAAGATTGAAGAGATTCAAGTTGATCCACCAAAAGCAAATGAAGTTCGACTTAAGATGCTTTCTTCCAGCATCTGCCACACTGATATCTCAAGCATTCAAGGAACTCCTATGATTCAGTTTTATCCTCTAGCACTTGGACATGAAGGAGTTGGGGTTGTAGAATCAGTTGGGAACACAGTCAAGAGTATGAAAGAAGGGGATATGGTGATTCCAACATACATAGGAGAGTGCCAAGAATGTGAGAATTGCATTTCAGGAAAATCAAATTTGTGCTTGACATATCCTCGGAGGTTCACTGGCTTGATGTCAGATAACACTTCAAGGATGTCCTGCAGAGGCCAGAGGCTATGCCACCTTTTCAGTTGTGCCACGTGGTCCGAGTACACGGTTGTCGATGTTAACTACCTTGTGAAGATTGATCCAAGCATGAATCCAGCACATGCCAGCTTCATCTCATGTGGATTCTCAACTGGCTATGGAGCTGCATGGAAGGAAGCCAGAGTTAAAAAAGGATCAAGTGTTACTGTTTTTGGTCTTGGTGCTGTTGAATTAGGGGGATCAGGTAAAACAATAATGCTTGGTGTAGGAGCTGAACCCTATGTATCACTTGGTGTGTTACCAATAATTTCTGGAAGAACTTTGAAAGGATCTGTACTTGGCGGGTTAAAATCCATATCAGACCTGCCCATCATTGCCGACAAATGCATTAAGCAGGAATTCCCTCTTGAAGAACTATTCACCCATGAGGTTCAATTAACGAATATAGAAGAAGCATTTGAGCTATTGAAACAACCAAATTGTGTGAAAGTTGTCATCAAGATATGA 870 0.4218 MEISGAVCWKVGEAVKIEEIQVDPPKANEVRLKMLSSSICHTDISSIQGTPMIQFYPLALGHEGVGVVESVGNTVKSMKEGDMVIPTYIGECQECENCISGKSNLCLTYPRRFTGLMSDNTSRMSCRGQRLCHLFSCATWSEYTVVDVNYLVKIDPSMNPAHASFISCGFSTGYGAAWKEARVKKGSSVTVFGLGAVELGGSGKTIMLGVGAEPYVSLGVLPIISGRTLKGSVLGGLKSISDLPIIADKCIKQEFPLEELFTHEVQLTNIEEAFELLKQPNCVKVVIKI 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181395g00003 289 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 61 75 IPR002328 GO:0008270|GO:0016491
Stsc181395g00003 289 FunFam alcohol dehydrogenase 1-like isoform X1 11 172 - -
Stsc181395g00003 289 PANTHER ALCOHOL DEHYDROGENASE 201 281 - -
Stsc181395g00003 289 Gene3D - 201 232 - -
Stsc181395g00003 289 SUPERFAMILY GroES-like 239 287 IPR011032 -
Stsc181395g00003 289 Gene3D - 233 285 - -
Stsc181395g00003 289 Pfam Alcohol dehydrogenase GroES-like domain 28 154 IPR013154 -
Stsc181395g00003 289 Gene3D - 6 172 - -
Stsc181395g00003 289 Gene3D - 173 197 - -
Stsc181395g00003 289 SUPERFAMILY GroES-like 1 189 IPR011032 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181395g00003 Stsc-Chr181395 17169 23250 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181395g00003 28 174 Monolignol Biosynthesis Gene Families AT4G39330 29.054 4.56e-14 69.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181395g00003 K00121 - gmx:100798341 307.375