Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181392g00004 ATGGAGAAAGTGAAAGAGTCTTTACTCAACTGGGCAAAAGAGGCAGGTTTCTCACTGCCAGATGTTTTATCAGTAAATTGTACATCCCTTGCCAATACATCTGATATTTTCACCAAGATACTTGGTTTAAGCCAATCACCGGGAAAAAGGGTTTCGGCAACACCCTTGCAACAACTTCAGAACATGTATTCACAGAAATCTTCTACCAGGAATATGACGTTGATAGTTGCTGATGAATTAGATTACCTAATAACCAGAGACAGGGCTGTGCTCCATGACCTTTTCATGCTTACCACCTTTCCATTTGCCAGATGTATATTAATAGGGGTAGCAAATGCTATTGACCTAGCTGATCGTTTTCTTCCAAGGCTTACATCCCTGAATTGCAAGCCTACTGTTGTGACTTTTCGTGCCTACTCTAAAGATCAGATCCTTAGGATTCTTGAAGAAAGGCTAACTGAACTTCCTTACACTGTCTTTCAACGCCAAGCACTGGAACTATGTGCTAGGAAAGTTGCTGCAGCTTCTGGAGATATGCGGAAAGCTCTTTGTATATGCAGGAGTGCAATAGAGATGCTAGAAGCAGAAATTAGAGAATCTGTGTGCAATTTGAATACTCCATTGGAAGAGAAATCATCTTCTGAACAAAATATGGCTACAGCTTCTGATCCTATGAAGAAGCAAGAATTTGACATTGTAAGGATTGACCATATGGCTCGTGCTTTGTCAAAGACATATAGATCACCAGTGGTGGATACTATACAGTCTCTGCCACATCATCAACAGATTATTCTCTGCTCATCCATGAAACATTTCCGTGGAGCCAAGAAAGATACAATCCTTGGAGAGTTATATAAATCATACTCTGAGTTATGCAAATTGACACTTATTCCCCCAGCAGGAATATTGGAATTCTCAAACATGTGCAGAGTGCTTAATGATCAGGGGCTCATTAAACTAGGACCGTCGCGAGAGGATAAATTGAAAAGGGTAACTCCAAAAGTTGATGAGGCTGATATTACTTTTGCATTGCAGGGAATCAGGTTTTTTAGAAATTGTCTTCAATGA 1068 0.4017 MEKVKESLLNWAKEAGFSLPDVLSVNCTSLANTSDIFTKILGLSQSPGKRVSATPLQQLQNMYSQKSSTRNMTLIVADELDYLITRDRAVLHDLFMLTTFPFARCILIGVANAIDLADRFLPRLTSLNCKPTVVTFRAYSKDQILRILEERLTELPYTVFQRQALELCARKVAAASGDMRKALCICRSAIEMLEAEIRESVCNLNTPLEEKSSSEQNMATASDPMKKQEFDIVRIDHMARALSKTYRSPVVDTIQSLPHHQQIILCSSMKHFRGAKKDTILGELYKSYSELCKLTLIPPAGILEFSNMCRVLNDQGLIKLGPSREDKLKRVTPKVDEADITFALQGIRFFRNCLQ 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181392g00004 355 FunFam Cell division control protein 257 347 - -
Stsc181392g00004 355 SMART Cdc6_C_2 265 344 IPR015163 -
Stsc181392g00004 355 Gene3D - 1 127 IPR027417 -
Stsc181392g00004 355 Pfam CDC6, C terminal winged helix domain 265 343 IPR015163 -
Stsc181392g00004 355 FunFam Cell division control protein 128 254 - -
Stsc181392g00004 355 Pfam AAA domain 2 99 IPR003593 GO:0016887
Stsc181392g00004 355 SUPERFAMILY "Winged helix" DNA-binding domain 250 353 IPR036390 -
Stsc181392g00004 355 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 21 201 IPR027417 -
Stsc181392g00004 355 Gene3D - 128 253 - -
Stsc181392g00004 355 Gene3D - 254 341 IPR036388 -
Stsc181392g00004 355 PANTHER CELL DIVISION CONTROL PROTEIN 6-RELATED 2 353 - -
Stsc181392g00004 355 Pfam AAA lid domain 161 195 IPR041083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181392g00004 Stsc-Chr181392 15943 20691 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181392g00004 1 354 Core DNA Replication Machinery Family AT2G29680 63.128 2.48e-158 452
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181392g00004 K02213 - gmx:100791200 600.897