Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181392g00003 ATGGAGAAAGTGAAAGAGTCTTTACTCAACTGGGCAAAAGAGGCAGGTTTCTCACTGCCAGATGTTTTATCAGTAAATTGTACATCCCTTGCCAATACATCTGATATTTTCACCAAGATACTTGGTTTAAGCCAATCACCGGGAAAAAGGGTTTCGGCAACACCCTTGCAACAACTTCAGAACATGTATTCACAGAAATCTTCTACCAGGAATATGACGTTGATAGTTGCTGATGAATTAGATTACCTAATAACCAGAGACAGGGCTGTGCTCCATGACCTTTTCATGCTTACCACCTTCCCATTTGCCAGATGTATATTAATAGGGGTAGCAAATGCTATTGACCTAGCTGATCGATTTCTTCCAAGGCTCACATCCCTAAATTGCAAGCCTACTGTTGTAACTTTTCGTGCTTACTCTAAAGATCAGATCCTTAGGATCCTTGAAGAAAGGCTAACTGAACTTCCTTACACGGTCTTTCAACGCCAAGCACTGGAACTATGTGCTAGACTGCTAGGAAAGTTGCTGCAGCTTCTGGAGATATGCGGAAAGTTCTTTGTATATGCAGGGAGTACAATAGAGATGCTAGAAGCAGAAATTAGAGAATCTGTGAGCAATTTGAATACTCCATTGGAAGAGAAATCATCCTCTGAACAAAATATGGCTACAGCTTCTGATCCTATGAAGAAGCAAGAATTTGATATTGTAAGGATTGACTATATGGCTCGTGCTTTGTCAAAGACATATAAATCACCTGTGGTGGATACCATACCGTCTCTGCCGCATCATCAACAGATTATTCTCTGCTCATCCATGAAACATTTCCGTGGAGCCAAGAAAGATACAATCCTTGGAGAGTTATATAAATCATACTCTGAGTTATACAAATCGACGCTTATTCCCCCAGCAGGAATATTGGAATTCTCAAACATGTGCAGAGTGCTTAATGATCAGGGGCTCATTAAACTAGGACCATCATGA 981 0.4067 MEKVKESLLNWAKEAGFSLPDVLSVNCTSLANTSDIFTKILGLSQSPGKRVSATPLQQLQNMYSQKSSTRNMTLIVADELDYLITRDRAVLHDLFMLTTFPFARCILIGVANAIDLADRFLPRLTSLNCKPTVVTFRAYSKDQILRILEERLTELPYTVFQRQALELCARLLGKLLQLLEICGKFFVYAGSTIEMLEAEIRESVSNLNTPLEEKSSSEQNMATASDPMKKQEFDIVRIDYMARALSKTYKSPVVDTIPSLPHHQQIILCSSMKHFRGAKKDTILGELYKSYSELYKSTLIPPAGILEFSNMCRVLNDQGLIKLGPS 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181392g00003 326 Gene3D - 1 128 IPR027417 -
Stsc181392g00003 326 Pfam CDC6, C terminal winged helix domain 268 324 IPR015163 -
Stsc181392g00003 326 SUPERFAMILY "Winged helix" DNA-binding domain 253 323 IPR036390 -
Stsc181392g00003 326 Pfam AAA domain 2 99 IPR003593 GO:0016887
Stsc181392g00003 326 PANTHER CELL DIVISION CONTROL PROTEIN 6-RELATED 2 322 - -
Stsc181392g00003 326 Gene3D - 129 257 - -
Stsc181392g00003 326 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 21 195 IPR027417 -
Stsc181392g00003 326 Gene3D - 258 326 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181392g00003 Stsc-Chr181392 15943 31337 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181392g00003 1 323 Core DNA Replication Machinery Family AT2G29680 56.798 4.09e-121 356
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181392g00003 K02213 - gmx:100791200 500.745